RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 BTNL9Q6UXG8 535 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 FASTKD5Q7L8L6 764 aaKnown RBP8.76□□□□□ -1.01
VPS8-218ENST00000465818 FAM160B2Q86V87 743 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 TRIM22Q8IYM9 498 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 ADGRF4Q8IZF3 695 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 SMARCC2Q8TAQ2 1214 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 KIFC2Q96AC6 838 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 CAPNS2Q96L46 248 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 SLF1Q9BQI6 1058 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 LZTS2Q9BRK4 669 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 LLPHQ9BRT6 129 aaKnown RBP8.76□□□□□ -1.01
VPS8-218ENST00000465818 TRIM56Q9BRZ2 755 aaKnown RBP8.76□□□□□ -1.01
VPS8-218ENST00000465818 RNF26Q9BY78 433 aaPredicted RBP8.76□□□□□ -1.01
VPS8-218ENST00000465818 BRD7Q9NPI1 651 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 KANSL3Q9P2N6 904 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 ORC3Q9UBD5 711 aaPredicted RBP8.76□□□□□ -1.01
VPS8-218ENST00000465818 FEM1BQ9UK73 627 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 PPP1R9AQ9ULJ8 1098 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 PRR12Q9ULL5 1215 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 SMC3Q9UQE7 1217 aa8.76□□□□□ -1.01
VPS8-218ENST00000465818 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.76□□□□□ -1.01
VPS8-218ENST00000465818 PLXNA1Q9UIW2 1896 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 LRRC37A2A6NM11 1700 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 A0A1W2PP55 124 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 MANSC4A6NHS7 340 aaPredicted RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 PLA2G6O60733 806 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 ATP2B1P20020 1258 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 GJB2P29033 226 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 HMGN5P82970 282 aaKnown RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 SSRP1Q08945 709 aaKnown RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 SFSWAPQ12872 951 aaKnown RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 UBAP2LQ14157 1087 aaKnown RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 CDC37Q16543 378 aaPredicted RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 CTC1Q2NKJ3 1217 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 GPAT2Q6NUI2 795 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 CHURC1Q8WUH1 139 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 ATG4CQ96DT6 458 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 RRP36Q96EU6 259 aaKnown RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 INTS4Q96HW7 963 aaKnown RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 AIFM3Q96NN9 605 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 IPO9Q96P70 1041 aaKnown RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 PIGSQ96S52 555 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 ASCC2Q9H1I8 757 aaPredicted RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 RIOX1Q9H6W3 641 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 JMJD4Q9H9V9 463 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 VAT1LQ9HCJ6 419 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 NEUROD4Q9HD90 331 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 ZFATQ9P243 1243 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 SEC63Q9UGP8 760 aaKnown RBP8.75□□□□□ -1.01
VPS8-218ENST00000465818 SALL4Q9UJQ4 1053 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 DNMT3LQ9UJW3 386 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 MYH7BA7E2Y1 1941 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 MYPNQ86TC9 1320 aa8.75□□□□□ -1.01
VPS8-218ENST00000465818 IGF2BP3O00425 579 aaKnown RBP eCLIP8.74□□□□□ -1.01
VPS8-218ENST00000465818 PPP1R11O60927 126 aaPredicted RBP8.74□□□□□ -1.01
VPS8-218ENST00000465818 AOC2O75106 756 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 GADD45BO75293 160 aaPredicted RBP8.74□□□□□ -1.01
VPS8-218ENST00000465818 SASH3O75995 380 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 SCG2P13521 617 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 FDPSP14324 419 aaKnown RBP8.74□□□□□ -1.01
VPS8-218ENST00000465818 AKAP17AQ02040 695 aaKnown RBP8.74□□□□□ -1.01
VPS8-218ENST00000465818 RBL2Q08999 1139 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 PAK2Q13177 524 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 NOGQ13253 232 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 PABPC4Q13310 644 aaKnown RBP eCLIP8.74□□□□□ -1.01
VPS8-218ENST00000465818 QRICH1Q2TAL8 776 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 DEFB115Q30KQ5 88 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 SAMD5Q5TGI4 173 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 KIAA0319Q5VV43 1072 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 WWC2Q6AWC2 1192 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 CCDC174Q6PII3 467 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 CATSPERGQ6ZRH7 1159 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 HEATR3Q7Z4Q2 680 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 ANKRD23Q86SG2 305 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 FAM43AQ8N2R8 423 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 MTMR8Q96EF0 704 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 PTPN18Q99952 460 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 RANBP17Q9H2T7 1088 aaKnown RBP8.74□□□□□ -1.01
VPS8-218ENST00000465818 KBTBD4Q9NVX7 518 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 TCHHQ07283 1943 aa8.74□□□□□ -1.01
VPS8-218ENST00000465818 ZNFX1Q9P2E3 1918 aaKnown RBP8.74□□□□□ -1.01
VPS8-218ENST00000465818 ZNF236Q9UL36 1845 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 PDHXO00330 501 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 ZBTB5O15062 677 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 EFSO43281 561 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 PRPF3O43395 683 aaKnown RBP8.73□□□□□ -1.01
VPS8-218ENST00000465818 DEXIO95424 95 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 CYP2C8P10632 490 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 ACPPP15309 386 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 TARSP26639 723 aaKnown RBP8.73□□□□□ -1.01
VPS8-218ENST00000465818 SMARCA1P28370 1054 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 HOXA7P31268 230 aaPredicted RBP8.73□□□□□ -1.01
VPS8-218ENST00000465818 HERVK_113P62684 666 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 ARID5AQ03989 594 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 SREBF2Q12772 1141 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 PKN1Q16512 942 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 PFKFB3Q16875 520 aaPredicted RBP8.73□□□□□ -1.01
VPS8-218ENST00000465818 USH1GQ495M9 461 aa8.73□□□□□ -1.01
VPS8-218ENST00000465818 COL13A1Q5TAT6 717 aaPredicted RBP8.73□□□□□ -1.01
VPS8-218ENST00000465818 PRPF38AQ8NAV1 312 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms