RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 TCIRG1Q13488 830 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 LAPTM5Q13571 262 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 NKPD1Q17RQ9 610 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 E4F1Q66K89 784 aaPredicted RBP5.85□□□□□ -1.47
CDK13-203ENST00000465643 KIF18BQ86Y91 864 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 TPH2Q8IWU9 490 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 BEND7Q8N7W2 519 aaPredicted RBP5.85□□□□□ -1.47
CDK13-203ENST00000465643 CHST14Q8NCH0 376 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 CLRN3Q8NCR9 226 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 ENOX1Q8TC92 643 aaKnown RBP5.85□□□□□ -1.47
CDK13-203ENST00000465643 MFSD14AQ96MC6 490 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 PSMD1Q99460 953 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 CDADC1Q9BWV3 514 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 CDIP1Q9H305 208 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 CABP5Q9NP86 173 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 CHST12Q9NRB3 414 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 GEMIN8Q9NWZ8 242 aaKnown RBP5.85□□□□□ -1.47
CDK13-203ENST00000465643 KNSTRNQ9Y448 316 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 USP6P35125 1406 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 NSD3Q9BZ95 1437 aa5.85□□□□□ -1.47
CDK13-203ENST00000465643 PHLPP1O60346 1717 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 MYOM1P52179 1685 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 TTC21BQ7Z4L5 1316 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 FAM155AB1AL88 458 aaPredicted RBP5.84□□□□□ -1.47
CDK13-203ENST00000465643 KRT37O76014 449 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 ZSCAN20P17040 1043 aaPredicted RBP5.84□□□□□ -1.47
CDK13-203ENST00000465643 GRIK1P39086 918 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 CPSF1Q10570 1443 aaKnown RBP5.84□□□□□ -1.47
CDK13-203ENST00000465643 EEF1DP3Q658K8 133 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 TXNRD3Q86VQ6 643 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 PIWIL2Q8TC59 973 aaKnown RBP5.84□□□□□ -1.47
CDK13-203ENST00000465643 JPH3Q8WXH2 748 aaPredicted RBP5.84□□□□□ -1.47
CDK13-203ENST00000465643 LRRC59Q96AG4 307 aaKnown RBP5.84□□□□□ -1.47
CDK13-203ENST00000465643 CHAMP1Q96JM3 812 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 JAM3Q9BX67 310 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 C7orf69Q9H7B7 122 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 ZSWIM5Q9P217 1185 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 ADAMTS8Q9UP79 889 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 CD163L1Q9NR16 1453 aa5.84□□□□□ -1.47
CDK13-203ENST00000465643 H3BS24 57 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 FGF10O15520 208 aaPredicted RBP5.84□□□□□ -1.48
CDK13-203ENST00000465643 DHX15O43143 795 aaKnown RBP5.84□□□□□ -1.48
CDK13-203ENST00000465643 ABLIM3O94929 683 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 PAMP19021 973 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 TPP2P29144 1249 aaPredicted RBP5.84□□□□□ -1.48
CDK13-203ENST00000465643 KCNAB2Q13303 367 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 PCBP2Q15366 365 aaKnown RBP eCLIP5.84□□□□□ -1.48
CDK13-203ENST00000465643 KIZQ2M2Z5 673 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 TREML4Q6UXN2 200 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 C22orf34Q6ZV56 151 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 TSPYL5Q86VY4 417 aaPredicted RBP5.84□□□□□ -1.48
CDK13-203ENST00000465643 GIMAP7Q8NHV1 300 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 HSPA12BQ96MM6 686 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 FAM83CQ9BQN1 747 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 OXSMQ9NWU1 459 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 BTG4Q9NY30 223 aa5.84□□□□□ -1.48
CDK13-203ENST00000465643 LUC7L2Q9Y383 392 aaKnown RBP5.84□□□□□ -1.48
CDK13-203ENST00000465643 NHSL1Q5SYE7 1610 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 AHDC1Q5TGY3 1603 aaPredicted RBP5.83□□□□□ -1.48
CDK13-203ENST00000465643 PXDNQ92626 1479 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 EDC4Q6P2E9 1401 aaKnown RBP5.83□□□□□ -1.48
CDK13-203ENST00000465643 TMEM82A0PJX8 343 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 LCHNA4D1U4 455 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 GNAT3A8MTJ3 354 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 NAT1P18440 290 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 BCL6P41182 706 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 LSSP48449 732 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 MLC1Q15049 377 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 NME9Q86XW9 330 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 CLEC10AQ8IUN9 316 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 EXOC8Q8IYI6 725 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 FUBP3Q96I24 572 aaKnown RBP eCLIP5.83□□□□□ -1.48
CDK13-203ENST00000465643 NACC1Q96RE7 527 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 CATSPERZQ9NTU4 200 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 GPATCH2Q9NW75 528 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 SBNO1A3KN83 1393 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 CGNL1Q0VF96 1302 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 SPATA31A3Q5VYP0 1347 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 TTC21AQ8NDW8 1320 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 AKAP12Q02952 1782 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 TNS3Q68CZ2 1445 aa5.83□□□□□ -1.48
CDK13-203ENST00000465643 IGF2BP3O00425 579 aaKnown RBP eCLIP5.82□□□□□ -1.48
CDK13-203ENST00000465643 TGM5O43548 720 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 GRK2P25098 689 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 GRK3P35626 688 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 KPNA1P52294 538 aaPredicted RBP5.82□□□□□ -1.48
CDK13-203ENST00000465643 OXCT1P55809 520 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 INAVAQ3KP66 663 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 FAM102BQ5T8I3 360 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 OSTM1Q86WC4 334 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 LINC00116Q8NCU8 138 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 DPF3Q92784 378 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 UBE2FQ969M7 185 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 FBXW5Q969U6 566 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 AHCYL2Q96HN2 611 aaKnown RBP5.82□□□□□ -1.48
CDK13-203ENST00000465643 PTCHD1Q96NR3 888 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 MMP19Q99542 508 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 SSBP4Q9BWG4 385 aaPredicted RBP5.82□□□□□ -1.48
CDK13-203ENST00000465643 C14orf119Q9NWQ9 140 aa5.82□□□□□ -1.48
CDK13-203ENST00000465643 BRD4O60885 1362 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms