RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 LMBR1Q8WVP7 490 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 SEPT1Q8WYJ6 367 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 KATNAL1Q9BW62 490 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 OSBPL7Q9BZF2 842 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 TMEM39AQ9NV64 488 aa8.75□□□□□ -1.01
THBS3-205ENST00000465596 NOP56O00567 594 aaKnown RBP8.74□□□□□ -1.01
THBS3-205ENST00000465596 SOX1O00570 391 aaPredicted RBP8.74□□□□□ -1.01
THBS3-205ENST00000465596 TREHO43280 583 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 ZNF862O60290 1169 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 SUPT20HL2P0C7V6 817 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 TOB1P50616 345 aaPredicted RBP8.74□□□□□ -1.01
THBS3-205ENST00000465596 FXR1P51114 621 aaKnown RBP eCLIP8.74□□□□□ -1.01
THBS3-205ENST00000465596 FOSBP53539 338 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 GUCY1B3Q02153 619 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 PLCB4Q15147 1175 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 TCTN1Q2MV58 587 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 HABP4Q5JVS0 413 aaKnown RBP8.74□□□□□ -1.01
THBS3-205ENST00000465596 PLPPR4Q7Z2D5 763 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 POTEDQ86YR6 584 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 MTMR9Q96QG7 549 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 CEP89Q96ST8 783 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 RIT2Q99578 217 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 ZNF577Q9BSK1 485 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 UNC45AQ9H3U1 944 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 HIPK3Q9H422 1215 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 PRDM5Q9NQX1 630 aaPredicted RBP8.74□□□□□ -1.01
THBS3-205ENST00000465596 MAFBQ9Y5Q3 323 aaPredicted RBP8.74□□□□□ -1.01
THBS3-205ENST00000465596 MUC3AQ02505 3323 aa8.74□□□□□ -1.01
THBS3-205ENST00000465596 TRIP11Q15643 1979 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 C5orf42Q9H799 3197 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 CCDC194A0A1B0GVG4 234 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 DDX39AO00148 427 aaKnown RBP8.73□□□□□ -1.01
THBS3-205ENST00000465596 EML1O00423 815 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 TLR3O15455 904 aaKnown RBP8.73□□□□□ -1.01
THBS3-205ENST00000465596 CSF2RAP15509 400 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 RAG1P15918 1043 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 GCFC2P16383 781 aaKnown RBP8.73□□□□□ -1.01
THBS3-205ENST00000465596 XBP1P17861 261 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 ZNF76P36508 570 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 PTK7Q13308 1070 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 PPP2R5CQ13362 524 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 PTGISQ16647 500 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 LETM2Q2VYF4 491 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 FAM47CQ5HY64 1035 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 UTP14CQ5TAP6 766 aaKnown RBP8.73□□□□□ -1.01
THBS3-205ENST00000465596 RUFY4Q6ZNE9 571 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 RPAINQ86UA6 219 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 SMAP1Q8IYB5 467 aaPredicted RBP8.73□□□□□ -1.01
THBS3-205ENST00000465596 TDHQ8IZJ6 230 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 C4orf32Q8N8J7 132 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 SNX21Q969T3 373 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 VTI1AQ96AJ9 217 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 ZBTB10Q96DT7 871 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 C8orf76Q96K31 380 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 SDF4Q9BRK5 362 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 PPP1R12CQ9BZL4 782 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 TMEM60Q9H2L4 133 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 FOXP1Q9H334 677 aaPredicted RBP8.73□□□□□ -1.01
THBS3-205ENST00000465596 TBC1D22BQ9NU19 505 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 ERAP1Q9NZ08 941 aa8.73□□□□□ -1.01
THBS3-205ENST00000465596 WRAP73Q9P2S5 460 aaPredicted RBP8.73□□□□□ -1.01
THBS3-205ENST00000465596 DDX25Q9UHL0 483 aaKnown RBP8.73□□□□□ -1.01
THBS3-205ENST00000465596 PDCD11Q14690 1871 aaKnown RBP8.72□□□□□ -1.01
THBS3-205ENST00000465596 TBX3O15119 743 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 NBNO60934 754 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 CXCL10P02778 98 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 IQCF3P0C7M6 154 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 CKBP12277 381 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 MARK3P27448 753 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 GJB2P29033 226 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 KRT76Q01546 638 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 FPGSQ05932 587 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 MGAT3Q09327 533 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 SHHQ15465 462 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 LRIT3Q3SXY7 679 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 TMEM240Q5SV17 173 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 LRCH2Q5VUJ6 765 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 NOSTRINQ8IVI9 506 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 LINC01465Q8N7H1 131 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 C7orf31Q8N865 590 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 CAGE1Q8TC20 777 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 TRAPPC12Q8WVT3 735 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 SCLYQ96I15 445 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 FAM20AQ96MK3 541 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.72□□□□□ -1.01
THBS3-205ENST00000465596 SMARCAD1Q9H4L7 1026 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 SETD4Q9NVD3 440 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 ZNF215Q9UL58 517 aaPredicted RBP8.72□□□□□ -1.01
THBS3-205ENST00000465596 NRCAMQ92823 1304 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 COL1A2P08123 1366 aa8.72□□□□□ -1.01
THBS3-205ENST00000465596 PLXNA4Q9HCM2 1894 aa8.71□□□□□ -1.01
THBS3-205ENST00000465596 C17orf102A2RUQ5 167 aa8.71□□□□□ -1.02
THBS3-205ENST00000465596 WDR64B1ANS9 1081 aa8.71□□□□□ -1.02
THBS3-205ENST00000465596 K7ELQ4 463 aaPredicted RBP8.71□□□□□ -1.02
THBS3-205ENST00000465596 CCNT1O60563 726 aaKnown RBP8.71□□□□□ -1.02
THBS3-205ENST00000465596 GAS7O60861 476 aa8.71□□□□□ -1.02
THBS3-205ENST00000465596 C22orf31O95567 290 aa8.71□□□□□ -1.02
THBS3-205ENST00000465596 INSRRP14616 1297 aa8.71□□□□□ -1.02
THBS3-205ENST00000465596 SLC26A2P50443 739 aa8.71□□□□□ -1.02
THBS3-205ENST00000465596 STAT5BP51692 787 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms