RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 BARHL2Q9NY43 387 aa23.84■■□□□ 1.41
CSPG5-204ENST00000465441 TUBE1Q9UJT0 475 aa23.84■■□□□ 1.41
CSPG5-204ENST00000465441 TRANK1O15050 2925 aa23.83■■□□□ 1.41
CSPG5-204ENST00000465441 INSRRP14616 1297 aa23.83■■□□□ 1.41
CSPG5-204ENST00000465441 CPA1P15085 419 aa23.83■■□□□ 1.41
CSPG5-204ENST00000465441 EPC2Q52LR7 807 aa23.83■■□□□ 1.41
CSPG5-204ENST00000465441 CEP55Q53EZ4 464 aa23.83■■□□□ 1.41
CSPG5-204ENST00000465441 TEX2Q8IWB9 1127 aa23.83■■□□□ 1.41
CSPG5-204ENST00000465441 ZBTB10Q96DT7 871 aa23.83■■□□□ 1.41
CSPG5-204ENST00000465441 SDF4Q9BRK5 362 aa23.83■■□□□ 1.41
CSPG5-204ENST00000465441 NAP1L2Q9ULW6 460 aaPredicted RBP23.83■■□□□ 1.41
CSPG5-204ENST00000465441 NFASCO94856 1347 aa23.83■■□□□ 1.4
CSPG5-204ENST00000465441 RRN3P2A6NIE6 340 aa23.82■■□□□ 1.4
CSPG5-204ENST00000465441 hCG_1984214I3L0E3 225 aa23.82■■□□□ 1.4
CSPG5-204ENST00000465441 MEIS1O00470 390 aa23.82■■□□□ 1.4
CSPG5-204ENST00000465441 HMGB1P09429 215 aaKnown RBP23.82■■□□□ 1.4
CSPG5-204ENST00000465441 CLK2P49760 499 aaKnown RBP23.82■■□□□ 1.4
CSPG5-204ENST00000465441 ACTR2P61160 394 aa23.82■■□□□ 1.4
CSPG5-204ENST00000465441 LPIN1Q14693 890 aa23.82■■□□□ 1.4
CSPG5-204ENST00000465441 ZNF713Q8N859 430 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-204ENST00000465441 KCNB2Q92953 911 aa23.82■■□□□ 1.4
CSPG5-204ENST00000465441 SAMD11Q96NU1 681 aa23.82■■□□□ 1.4
CSPG5-204ENST00000465441 AZI2Q9H6S1 392 aa23.82■■□□□ 1.4
CSPG5-204ENST00000465441 AGO4Q9HCK5 861 aaKnown RBP23.82■■□□□ 1.4
CSPG5-204ENST00000465441 CDY2AQ9Y6F7 541 aa23.82■■□□□ 1.4
CSPG5-204ENST00000465441 COL4A4P53420 1690 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-204ENST00000465441 ENPP3O14638 875 aa23.81■■□□□ 1.4
CSPG5-204ENST00000465441 ITGB3BPQ13352 177 aaPredicted RBP23.81■■□□□ 1.4
CSPG5-204ENST00000465441 GLT8D2Q9H1C3 349 aa23.81■■□□□ 1.4
CSPG5-204ENST00000465441 SIP14410 1827 aa23.81■■□□□ 1.4
CSPG5-204ENST00000465441 MUC3AQ02505 3323 aa23.81■■□□□ 1.4
CSPG5-204ENST00000465441 XIRP2A4UGR9 3374 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.8■■□□□ 1.4
CSPG5-204ENST00000465441 ATG7O95352 703 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 ZNF76P36508 570 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 SREBF1P36956 1147 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 STAT5BP51692 787 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 RCAN1P53805 252 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 FGD1P98174 961 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 APOBRQ0VD83 1088 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 AP3B2Q13367 1082 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 PLCB4Q15147 1175 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 FBXO47Q5MNV8 452 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 JAKMIP3Q5VZ66 844 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 Q6ZUG5 572 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 PLPPR4Q7Z2D5 763 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 TMEM192Q8IY95 271 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 TNPO1Q92973 898 aaKnown RBP23.8■■□□□ 1.4
CSPG5-204ENST00000465441 IL17RAQ96F46 866 aa23.8■■□□□ 1.4
CSPG5-204ENST00000465441 H3BNC9 293 aa23.79■■□□□ 1.4
CSPG5-204ENST00000465441 METAP2P50579 478 aaKnown RBP eCLIP23.79■■□□□ 1.4
CSPG5-204ENST00000465441 GPM6BQ13491 265 aa23.79■■□□□ 1.4
CSPG5-204ENST00000465441 PFKFB3Q16875 520 aaPredicted RBP23.79■■□□□ 1.4
CSPG5-204ENST00000465441 FAM49AQ9H0Q0 323 aaPredicted RBP23.79■■□□□ 1.4
CSPG5-204ENST00000465441 AGO3Q9H9G7 860 aaKnown RBP23.79■■□□□ 1.4
CSPG5-204ENST00000465441 TRPC6Q9Y210 931 aa23.79■■□□□ 1.4
CSPG5-204ENST00000465441 MRPS6P82932 125 aaKnown RBP23.78■■□□□ 1.4
CSPG5-204ENST00000465441 TRAPPC12Q8WVT3 735 aa23.78■■□□□ 1.4
CSPG5-204ENST00000465441 MRPL38Q96DV4 380 aaKnown RBP23.78■■□□□ 1.4
CSPG5-204ENST00000465441 JAKMIP1Q96N16 626 aaKnown RBP23.78■■□□□ 1.4
CSPG5-204ENST00000465441 PCDHA2Q9Y5H9 948 aa23.78■■□□□ 1.4
CSPG5-204ENST00000465441 SNX14Q9Y5W7 946 aa23.78■■□□□ 1.4
CSPG5-204ENST00000465441 CCDC196A0A1B0GTZ2 297 aa23.77■■□□□ 1.4
CSPG5-204ENST00000465441 ADAMTS3O15072 1205 aa23.77■■□□□ 1.4
CSPG5-204ENST00000465441 SCG2P13521 617 aa23.77■■□□□ 1.4
CSPG5-204ENST00000465441 HSPA4P34932 840 aa23.77■■□□□ 1.4
CSPG5-204ENST00000465441 IER5Q5VY09 327 aa23.77■■□□□ 1.4
CSPG5-204ENST00000465441 TSHZ1Q6ZSZ6 1077 aa23.77■■□□□ 1.4
CSPG5-204ENST00000465441 NIPA1Q7RTP0 329 aa23.77■■□□□ 1.4
CSPG5-204ENST00000465441 FIBCD1Q8N539 461 aa23.77■■□□□ 1.4
CSPG5-204ENST00000465441 BRF1Q92994 677 aa23.77■■□□□ 1.4
CSPG5-204ENST00000465441 UBE2ZQ9H832 354 aaPredicted RBP23.77■■□□□ 1.4
CSPG5-204ENST00000465441 IGKV6D-21A0A0A0MT36 114 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 POTEB3A0JP26 581 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 FAM86B1E9PN63 330 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 DDX39AO00148 427 aaKnown RBP23.76■■□□□ 1.39
CSPG5-204ENST00000465441 CCNE2O96020 404 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 RPLP2P05387 115 aaKnown RBP23.76■■□□□ 1.39
CSPG5-204ENST00000465441 FAM86B2P0C5J1 330 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 TMEM62Q0P6H9 643 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 PTPROQ16827 1216 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 BLOC1S2Q6QNY1 142 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 POTEBQ6S5H4 581 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 ABHD15Q6UXT9 468 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 RTN4RL1Q86UN2 441 aaPredicted RBP23.76■■□□□ 1.39
CSPG5-204ENST00000465441 PLA2G4DQ86XP0 818 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 SQORQ9Y6N5 450 aa23.76■■□□□ 1.39
CSPG5-204ENST00000465441 DHX15O43143 795 aaKnown RBP23.75■■□□□ 1.39
CSPG5-204ENST00000465441 PRPF3O43395 683 aaKnown RBP23.75■■□□□ 1.39
CSPG5-204ENST00000465441 CYP3A4P08684 503 aa23.75■■□□□ 1.39
CSPG5-204ENST00000465441 CD52P31358 61 aa23.75■■□□□ 1.39
CSPG5-204ENST00000465441 PKN1Q16512 942 aa23.75■■□□□ 1.39
CSPG5-204ENST00000465441 CRYGNQ8WXF5 182 aa23.75■■□□□ 1.39
CSPG5-204ENST00000465441 UIMC1Q96RL1 719 aa23.75■■□□□ 1.39
CSPG5-204ENST00000465441 ZMYND12Q9H0C1 365 aa23.75■■□□□ 1.39
CSPG5-204ENST00000465441 TRPV2Q9Y5S1 764 aa23.75■■□□□ 1.39
CSPG5-204ENST00000465441 SMIM35A0A1B0GVV1 85 aa23.74■■□□□ 1.39
CSPG5-204ENST00000465441 COL9A1P20849 921 aa23.74■■□□□ 1.39
CSPG5-204ENST00000465441 SLC26A2P50443 739 aa23.74■■□□□ 1.39
CSPG5-204ENST00000465441 MTHFD1LQ6UB35 978 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms