RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 LGR5O75473 907 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 ATG7O95352 703 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 SMIM10L2AP0DMW4 78 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 SMIM10L2BP0DMW5 78 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 IGBP1P78318 339 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 SF3A1Q15459 793 aaKnown RBP20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 BANK1Q8NDB2 785 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 TNPO1Q92973 898 aaKnown RBP20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 ATP6V0A1Q93050 837 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 ZNF396Q96N95 335 aaPredicted RBP20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 PCYT2Q99447 389 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 SEZ6LQ9BYH1 1024 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 RAB34Q9BZG1 259 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 SCN10AQ9Y5Y9 1956 aa20.81■□□□□ 0.92
SCAMP3-204ENST00000465312 GRIN2DO15399 1336 aa20.8■□□□□ 0.92
SCAMP3-204ENST00000465312 C17orf102A2RUQ5 167 aa20.8■□□□□ 0.92
SCAMP3-204ENST00000465312 POTEMA6NI47 508 aa20.8■□□□□ 0.92
SCAMP3-204ENST00000465312 EML1O00423 815 aa20.8■□□□□ 0.92
SCAMP3-204ENST00000465312 BMP15O95972 392 aa20.8■□□□□ 0.92
SCAMP3-204ENST00000465312 PPFIA1Q13136 1202 aa20.8■□□□□ 0.92
SCAMP3-204ENST00000465312 SNX17Q15036 470 aa20.8■□□□□ 0.92
SCAMP3-204ENST00000465312 DTHD1Q6ZMT9 781 aa20.8■□□□□ 0.92
SCAMP3-204ENST00000465312 PLPPR4Q7Z2D5 763 aa20.8■□□□□ 0.92
SCAMP3-204ENST00000465312 NR2E3Q9Y5X4 410 aa20.8■□□□□ 0.92
SCAMP3-204ENST00000465312 ALPK3Q96L96 1907 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 POTEB3A0JP26 581 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 HAS3O00219 553 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 CLTBP09497 229 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 SLC26A2P50443 739 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 CYP4A11Q02928 519 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 PTPN11Q06124 597 aaPredicted RBP20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 PTGISQ16647 500 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 C1orf53Q5VUE5 145 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 POTEBQ6S5H4 581 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 ERMNQ8TAM6 284 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 AFAP1L1Q8TED9 768 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 FTOQ9C0B1 505 aaKnown RBP eCLIP20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 TRPV6Q9H1D0 765 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 RNPEPQ9H4A4 650 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 TSHZ2Q9NRE2 1034 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 TRMT13Q9NUP7 481 aaKnown RBP20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 TMEM39AQ9NV64 488 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 GTF2IRD1Q9UHL9 959 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 CLIC4Q9Y696 253 aa20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 MYH9P35579 1960 aaKnown RBP20.79■□□□□ 0.92
SCAMP3-204ENST00000465312 IGKV6D-21A0A0A0MT36 114 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 B4GALT4O60513 344 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 DKC1O60832 514 aaKnown RBP eCLIP20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 GNAT1P11488 350 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 NCLP19338 710 aaKnown RBP20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 CDK7P50613 346 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 ATP2C1P98194 919 aaPredicted RBP20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 PRKCEQ02156 737 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 PLCB4Q15147 1175 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 EPHA7Q15375 998 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 UGCGQ16739 394 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 GDF6Q6KF10 455 aaPredicted RBP20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 FAM126BQ8IXS8 530 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 DYDC2Q96IM9 177 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 FAM167AQ96KS9 214 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 SETD4Q9NVD3 440 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 LRWD1Q9UFC0 647 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 SEPT9Q9UHD8 586 aaPredicted RBP20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 ZMYND8Q9ULU4 1186 aaPredicted RBP20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 RBM19Q9Y4C8 960 aaKnown RBP20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 IGSF9BQ9UPX0 1349 aa20.78■□□□□ 0.92
SCAMP3-204ENST00000465312 MYH15Q9Y2K3 1946 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 VWA3AA6NCI4 1184 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 P4HBP07237 508 aaKnown RBP20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 SYN1P17600 705 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 QARSP47897 775 aaKnown RBP20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 PSMC5P62195 406 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 CTTNQ14247 550 aaKnown RBP20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 STK38Q15208 465 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 GRIK4Q16099 956 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 ANKRD33Q7Z3H0 272 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 TPH2Q8IWU9 490 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 C4orf32Q8N8J7 132 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 SLC43A3Q8NBI5 491 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 CCDC43Q96MW1 224 aaKnown RBP20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 EIF2AK1Q9BQI3 630 aaKnown RBP20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 NRBP2Q9NSY0 501 aa20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 MAFBQ9Y5Q3 323 aaPredicted RBP20.77■□□□□ 0.92
SCAMP3-204ENST00000465312 MKI67P46013 3256 aaKnown RBP20.77■□□□□ 0.91
SCAMP3-204ENST00000465312 HBP1O60381 514 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 OATP04181 439 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 PRPHP41219 470 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 ZNF200P98182 395 aaPredicted RBP20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 SPIRE1Q08AE8 756 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 B3GNT9Q6UX72 402 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 ATP8B4Q8TF62 1192 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 TOX2Q96NM4 488 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 USP28Q96RU2 1077 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 LXNQ9BS40 222 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 RGL1Q9NZL6 768 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 TFIP11Q9UBB9 837 aaKnown RBP20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 KAT6AQ92794 2004 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 NRCAMQ92823 1304 aa20.76■□□□□ 0.91
SCAMP3-204ENST00000465312 DDX11L8A8MPP1 907 aa20.75■□□□□ 0.91
SCAMP3-204ENST00000465312 BRD1O95696 1058 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms