RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 PTGDRQ13258 359 aa19.08■□□□□ 0.64
USP39-211ENST00000465282 FAM47CQ5HY64 1035 aa19.08■□□□□ 0.64
USP39-211ENST00000465282 SWSAP1Q6NVH7 229 aa19.08■□□□□ 0.64
USP39-211ENST00000465282 FERMT3Q86UX7 667 aa19.08■□□□□ 0.64
USP39-211ENST00000465282 C4orf32Q8N8J7 132 aa19.08■□□□□ 0.64
USP39-211ENST00000465282 SPRYD3Q8NCJ5 442 aa19.08■□□□□ 0.64
USP39-211ENST00000465282 GJA10Q969M2 543 aa19.08■□□□□ 0.64
USP39-211ENST00000465282 TMEM60Q9H2L4 133 aa19.08■□□□□ 0.64
USP39-211ENST00000465282 GTF2IRD1Q9UHL9 959 aa19.08■□□□□ 0.64
USP39-211ENST00000465282 CEP131Q9UPN4 1083 aa19.08■□□□□ 0.64
USP39-211ENST00000465282 TRIP12Q14669 1992 aaPredicted RBP19.08■□□□□ 0.64
USP39-211ENST00000465282 NRCAMQ92823 1304 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 CHMP2AO43633 222 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 CD4P01730 458 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 ZSCAN22P10073 491 aaPredicted RBP19.07■□□□□ 0.64
USP39-211ENST00000465282 HOXC8P31273 242 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 SPIRE1Q08AE8 756 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 EPHA7Q15375 998 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 TMEM266Q2M3C6 531 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 ARL6IP4Q66PJ3 421 aaKnown RBP19.07■□□□□ 0.64
USP39-211ENST00000465282 PDXDC2PQ6P474 469 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 TRIM50Q86XT4 487 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 CCDC60Q8IWA6 550 aaPredicted RBP19.07■□□□□ 0.64
USP39-211ENST00000465282 ATP6V0A1Q93050 837 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 FAM167AQ96KS9 214 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 RAB34Q9BZG1 259 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 HDAC6Q9UBN7 1215 aa19.07■□□□□ 0.64
USP39-211ENST00000465282 IGSF9BQ9UPX0 1349 aa19.06■□□□□ 0.64
USP39-211ENST00000465282 CLTBP09497 229 aa19.06■□□□□ 0.64
USP39-211ENST00000465282 CHMP4BP1P59074 171 aa19.06■□□□□ 0.64
USP39-211ENST00000465282 FAAP100Q0VG06 881 aa19.06■□□□□ 0.64
USP39-211ENST00000465282 PDIA5Q14554 519 aa19.06■□□□□ 0.64
USP39-211ENST00000465282 NEK9Q8TD19 979 aa19.06■□□□□ 0.64
USP39-211ENST00000465282 RNPEPQ9H4A4 650 aa19.06■□□□□ 0.64
USP39-211ENST00000465282 GABBR1Q9UBS5 961 aa19.06■□□□□ 0.64
USP39-211ENST00000465282 PRKAG2Q9UGJ0 569 aa19.06■□□□□ 0.64
USP39-211ENST00000465282 STK24Q9Y6E0 443 aa19.06■□□□□ 0.64
USP39-211ENST00000465282 POTEB3A0JP26 581 aa19.05■□□□□ 0.64
USP39-211ENST00000465282 RRN3P2A6NIE6 340 aa19.05■□□□□ 0.64
USP39-211ENST00000465282 HBP1O60381 514 aa19.05■□□□□ 0.64
USP39-211ENST00000465282 B4GALT4O60513 344 aa19.05■□□□□ 0.64
USP39-211ENST00000465282 P4HBP07237 508 aaKnown RBP19.05■□□□□ 0.64
USP39-211ENST00000465282 SMIM10L2AP0DMW4 78 aa19.05■□□□□ 0.64
USP39-211ENST00000465282 SMIM10L2BP0DMW5 78 aa19.05■□□□□ 0.64
USP39-211ENST00000465282 FXR2P51116 673 aaKnown RBP eCLIP19.05■□□□□ 0.64
USP39-211ENST00000465282 ATP2C1P98194 919 aaPredicted RBP19.05■□□□□ 0.64
USP39-211ENST00000465282 NBR1Q14596 966 aa19.05■□□□□ 0.64
USP39-211ENST00000465282 POTEBQ6S5H4 581 aa19.05■□□□□ 0.64
USP39-211ENST00000465282 C7orf61Q8IZ16 206 aa19.05■□□□□ 0.64
USP39-211ENST00000465282 ATP8B4Q8TF62 1192 aa19.05■□□□□ 0.64
USP39-211ENST00000465282 BBXQ8WY36 941 aaPredicted RBP19.05■□□□□ 0.64
USP39-211ENST00000465282 DAXXQ9UER7 740 aaPredicted RBP19.05■□□□□ 0.64
USP39-211ENST00000465282 C17orf102A2RUQ5 167 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 EML1O00423 815 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 KIAA0355O15063 1070 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 QARSP47897 775 aaKnown RBP19.04■□□□□ 0.64
USP39-211ENST00000465282 PSMC5P62195 406 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 PLCB4Q15147 1175 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 PTGISQ16647 500 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 NCAPH2Q6IBW4 605 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 GDF6Q6KF10 455 aaPredicted RBP19.04■□□□□ 0.64
USP39-211ENST00000465282 DTHD1Q6ZMT9 781 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 NRBP2Q9NSY0 501 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 TMEM39AQ9NV64 488 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 NOD1Q9Y239 953 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 COL1A2P08123 1366 aa19.04■□□□□ 0.64
USP39-211ENST00000465282 F13A1P00488 732 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 RPLP2P05387 115 aaKnown RBP19.03■□□□□ 0.64
USP39-211ENST00000465282 MARK3P27448 753 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 TECP42680 631 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 PPFIA1Q13136 1202 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 ZNF484Q5JVG2 852 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 ATL3Q6DD88 541 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 CKAP2LQ8IYA6 745 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 ERMNQ8TAM6 284 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 ZNF396Q96N95 335 aaPredicted RBP19.03■□□□□ 0.64
USP39-211ENST00000465282 TRPV6Q9H1D0 765 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 PDLIM7Q9NR12 457 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 TRMT13Q9NUP7 481 aaKnown RBP19.03■□□□□ 0.64
USP39-211ENST00000465282 TBX21Q9UL17 535 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 TRPC6Q9Y210 931 aa19.03■□□□□ 0.64
USP39-211ENST00000465282 MORC2Q9Y6X9 1032 aaPredicted RBP19.03■□□□□ 0.64
USP39-211ENST00000465282 INSRRP14616 1297 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 ATP4AP20648 1035 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 ADAM17P78536 824 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 PTK7Q13308 1070 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 SF3A1Q15459 793 aaKnown RBP19.02■□□□□ 0.64
USP39-211ENST00000465282 GRIK4Q16099 956 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 XKR3Q5GH77 459 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 C4orf19Q8IY42 314 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 CCDC155Q8N6L0 562 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 IGSF22Q8N9C0 903 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 HSD17B14Q9BPX1 270 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 ZSWIM4Q9H7M6 989 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 SETD4Q9NVD3 440 aa19.02■□□□□ 0.64
USP39-211ENST00000465282 ZNF862O60290 1169 aa19.01■□□□□ 0.63
USP39-211ENST00000465282 BRD1O95696 1058 aa19.01■□□□□ 0.63
USP39-211ENST00000465282 OATP04181 439 aa19.01■□□□□ 0.63
USP39-211ENST00000465282 MUTP22033 750 aa19.01■□□□□ 0.63
USP39-211ENST00000465282 HAUS3Q68CZ6 603 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms