RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 KRBA1A5PL33 1030 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 PRR5-ARHGAP8B1AHC4 643 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 GGPS1O95749 300 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 WEE2P0C1S8 567 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 UBA1P22314 1058 aaKnown RBP13.35□□□□□ -0.27
SCAF8-205ENST00000464628 ARHGAP8P85298 464 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 SP2Q02086 613 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 ZSCAN25Q6NSZ9 544 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 LMBR1Q8WVP7 490 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 CASP10Q92851 521 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 AGO3Q9H9G7 860 aaKnown RBP13.35□□□□□ -0.27
SCAF8-205ENST00000464628 HCSTQ9UBK5 93 aa13.35□□□□□ -0.27
SCAF8-205ENST00000464628 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
SCAF8-205ENST00000464628 GPAA1O43292 621 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 EIF3JO75822 258 aaKnown RBP13.34□□□□□ -0.27
SCAF8-205ENST00000464628 EOMESO95936 686 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 IFIT2P09913 472 aaKnown RBP13.34□□□□□ -0.27
SCAF8-205ENST00000464628 EIF2AK2P19525 551 aaKnown RBP13.34□□□□□ -0.27
SCAF8-205ENST00000464628 TGM1P22735 817 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 MTHFRP42898 656 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 LMNB2Q03252 620 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 TDGQ13569 410 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 COL9A3Q14050 684 aaPredicted RBP13.34□□□□□ -0.27
SCAF8-205ENST00000464628 USH1GQ495M9 461 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 TPRNQ4KMQ1 711 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
SCAF8-205ENST00000464628 KIAA1841Q6NSI8 718 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 CES5AQ6NT32 575 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 RUFY4Q6ZNE9 571 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 TSHZ1Q6ZSZ6 1077 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 IFNL3Q8IZI9 196 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 MAML2Q8IZL2 1156 aaPredicted RBP13.34□□□□□ -0.27
SCAF8-205ENST00000464628 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
SCAF8-205ENST00000464628 GPR161Q8N6U8 529 aaKnown RBP13.34□□□□□ -0.27
SCAF8-205ENST00000464628 FEZF2Q8TBJ5 459 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 RMDN3Q96TC7 470 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 GPCPD1Q9NPB8 672 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 HCFC2Q9Y5Z7 792 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 CCDC171Q6TFL3 1326 aa13.34□□□□□ -0.27
SCAF8-205ENST00000464628 POTEMA6NI47 508 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 IPO8O15397 1037 aaKnown RBP13.33□□□□□ -0.28
SCAF8-205ENST00000464628 NARSO43776 548 aaKnown RBP13.33□□□□□ -0.28
SCAF8-205ENST00000464628 TBC1D8BQ0IIM8 1120 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 PPM1JQ5JR12 505 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 POTEGQ6S5H5 508 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 MAF1Q9H063 256 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 CYP26B1Q9NR63 512 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 PXMP2Q9NR77 195 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 TMEM260Q9NX78 707 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 NCDNQ9UBB6 729 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 FBXL21Q9UKT6 434 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 LZTS1Q9Y250 596 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 PCDHB12Q9Y5F1 795 aa13.33□□□□□ -0.28
SCAF8-205ENST00000464628 CACNA1IQ9P0X4 2223 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 COL4A3Q01955 1670 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 ZFYVE26Q68DK2 2539 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 TSPY2A6NKD2 308 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 M0R2C6 588 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 KINO60870 393 aaKnown RBP13.32□□□□□ -0.28
SCAF8-205ENST00000464628 NR3C2P08235 984 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 PDHBP11177 359 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 GNAT1P11488 350 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 CD52P31358 61 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 ARHGAP4P98171 946 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 PPARAQ07869 468 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 C1orf210Q8IVY1 113 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 COLGALT1Q8NBJ5 622 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 APPBP2Q92624 585 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 FRAT1Q92837 279 aaPredicted RBP13.32□□□□□ -0.28
SCAF8-205ENST00000464628 GPKOWQ92917 476 aaPredicted RBP eCLIP13.32□□□□□ -0.28
SCAF8-205ENST00000464628 TCF25Q9BQ70 676 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 BCAS3Q9H6U6 928 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 AAASQ9NRG9 546 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 LAMA4Q16363 1823 aa13.32□□□□□ -0.28
SCAF8-205ENST00000464628 STAG3L1P0CL83 205 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 SCG2P13521 617 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 GNAT2P19087 354 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 ARHGEF16Q5VV41 709 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 KANK3Q6NY19 840 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 TRIM50Q86XT4 487 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 THNSL1Q8IYQ7 743 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 MRPS27Q92552 414 aaKnown RBP13.31□□□□□ -0.28
SCAF8-205ENST00000464628 KIF1BPQ96EK5 621 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 PARD6AQ9NPB6 346 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 ENTPD7Q9NQZ7 604 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 DBR1Q9UK59 544 aaKnown RBP13.31□□□□□ -0.28
SCAF8-205ENST00000464628 CDY2AQ9Y6F7 541 aa13.31□□□□□ -0.28
SCAF8-205ENST00000464628 SPTLC1O15269 473 aa13.3□□□□□ -0.28
SCAF8-205ENST00000464628 DCNP07585 359 aaKnown RBP13.3□□□□□ -0.28
SCAF8-205ENST00000464628 SNHG28P0DPA3 235 aa13.3□□□□□ -0.28
SCAF8-205ENST00000464628 PLCB3Q01970 1234 aa13.3□□□□□ -0.28
SCAF8-205ENST00000464628 ZNF543Q08ER8 600 aa13.3□□□□□ -0.28
SCAF8-205ENST00000464628 DMWDQ09019 674 aa13.3□□□□□ -0.28
SCAF8-205ENST00000464628 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
SCAF8-205ENST00000464628 SPECC1Q5M775 1068 aa13.3□□□□□ -0.28
SCAF8-205ENST00000464628 RARS2Q5T160 578 aaKnown RBP13.3□□□□□ -0.28
SCAF8-205ENST00000464628 KCNV1Q6PIU1 500 aa13.3□□□□□ -0.28
SCAF8-205ENST00000464628 C12orf76Q8N812 135 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms