RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 PI4KAP2A4QPH2 592 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 FFAR3O14843 346 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 NCKAP1LP55160 1127 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 CASP7P55210 303 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 HTRA3P83110 453 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 EXOSC9Q06265 439 aaKnown RBP6.83□□□□□ -1.32
CD46-211ENST00000464082 GRAPQ13588 217 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 MAP3K11Q16584 847 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 CLEC16AQ2KHT3 1053 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 KSR2Q6VAB6 950 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 AGMOQ6ZNB7 445 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 DNAJC5GQ8N7S2 189 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 PI4KAP1Q8N8J0 262 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 ZBTB38Q8NAP3 1195 aaPredicted RBP6.83□□□□□ -1.32
CD46-211ENST00000464082 CCDC191Q8NCU4 936 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 GRAPLQ8TC17 118 aaPredicted RBP6.83□□□□□ -1.32
CD46-211ENST00000464082 VWCEQ96DN2 955 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 HHIPL1Q96JK4 782 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 KREMEN1Q96MU8 473 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 MAP3K2Q9Y2U5 619 aa6.83□□□□□ -1.32
CD46-211ENST00000464082 CDHR2Q9BYE9 1310 aa6.82□□□□□ -1.32
CD46-211ENST00000464082 MYH13Q9UKX3 1938 aa6.82□□□□□ -1.32
CD46-211ENST00000464082 TMEM82A0PJX8 343 aa6.82□□□□□ -1.32
CD46-211ENST00000464082 PCCAP05165 728 aaPredicted RBP6.82□□□□□ -1.32
CD46-211ENST00000464082 VEGFAP15692 232 aaPredicted RBP6.82□□□□□ -1.32
CD46-211ENST00000464082 PNLIPP16233 465 aa6.82□□□□□ -1.32
CD46-211ENST00000464082 ERVFRD-1P60508 538 aa6.82□□□□□ -1.32
CD46-211ENST00000464082 KRTAP1-1Q07627 177 aa6.82□□□□□ -1.32
CD46-211ENST00000464082 FSTL1Q12841 308 aa6.82□□□□□ -1.32
CD46-211ENST00000464082 CCDC85BQ15834 202 aaPredicted RBP6.82□□□□□ -1.32
CD46-211ENST00000464082 CWF19L2Q2TBE0 894 aaKnown RBP6.82□□□□□ -1.32
CD46-211ENST00000464082 ALG1LQ6GMV1 187 aa6.82□□□□□ -1.32
CD46-211ENST00000464082 PCDHA5Q9Y5H7 936 aa6.82□□□□□ -1.32
CD46-211ENST00000464082 ARAP2Q8WZ64 1704 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 THSD7BQ9C0I4 1608 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 YDJCA8MPS7 323 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 BBOX1O75936 387 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 PLCG1P19174 1290 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 TFE3P19532 575 aaPredicted RBP6.81□□□□□ -1.32
CD46-211ENST00000464082 KIR2DL1P43626 348 aaPredicted RBP6.81□□□□□ -1.32
CD46-211ENST00000464082 KIR2DL2P43627 348 aaPredicted RBP6.81□□□□□ -1.32
CD46-211ENST00000464082 TNNI2P48788 182 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 SLURP1P55000 103 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 RPL6Q02878 288 aaKnown RBP6.81□□□□□ -1.32
CD46-211ENST00000464082 FMR1Q06787 632 aaKnown RBP eCLIP6.81□□□□□ -1.32
CD46-211ENST00000464082 TSNAXIP1Q2TAA8 658 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 ZPBP2Q6X784 338 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 TMC6Q7Z403 805 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 FOXP3Q9BZS1 431 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 MIR1-1HGQ9H1L0 117 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 TAF1DQ9H5J8 278 aaPredicted RBP6.81□□□□□ -1.32
CD46-211ENST00000464082 CWC25Q9NXE8 425 aaPredicted RBP6.81□□□□□ -1.32
CD46-211ENST00000464082 RTL9Q8NET4 1388 aa6.81□□□□□ -1.32
CD46-211ENST00000464082 WTIPA6NIX2 430 aaPredicted RBP6.8□□□□□ -1.32
CD46-211ENST00000464082 F6X3S4 739 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 K7ESM1 405 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 BUB1BO60566 1050 aaPredicted RBP6.8□□□□□ -1.32
CD46-211ENST00000464082 PDE8AO60658 829 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 TNFRSF1AP19438 455 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 KCNC1P48547 511 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 LIG3P49916 1009 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 GPSM2P81274 684 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 ZXDAP98168 799 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 KIAA2012Q0VF49 1180 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 OLFML2BQ68BL8 750 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 RNF111Q6ZNA4 994 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 DDX46Q7L014 1031 aaKnown RBP6.8□□□□□ -1.32
CD46-211ENST00000464082 TRMT2AQ8IZ69 625 aaKnown RBP6.8□□□□□ -1.32
CD46-211ENST00000464082 GPC2Q8N158 579 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 RETREG2Q8NC44 543 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 SMC1BQ8NDV3 1235 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 TTLL11Q8NHH1 800 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 CRELD1Q96HD1 420 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 GPR101Q96P66 508 aaPredicted RBP6.8□□□□□ -1.32
CD46-211ENST00000464082 PLA2G12BQ9BX93 195 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 POLLQ9UGP5 575 aa6.8□□□□□ -1.32
CD46-211ENST00000464082 PASKQ96RG2 1323 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 CCER2I3L3R5 266 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 ABLIM1O14639 778 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 PPIP5K2O43314 1243 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 DDX58O95786 925 aaKnown RBP6.79□□□□□ -1.32
CD46-211ENST00000464082 YARSP54577 528 aaKnown RBP6.79□□□□□ -1.32
CD46-211ENST00000464082 RPS8P62241 208 aaKnown RBP6.79□□□□□ -1.32
CD46-211ENST00000464082 CXCL9Q07325 125 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 SLFN5Q08AF3 891 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 GCKRQ14397 625 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 ZFYVE27Q5T4F4 411 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 BEND3Q5T5X7 828 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 TMC4Q7Z404 712 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 C16orf71Q8IYS4 520 aaPredicted RBP6.79□□□□□ -1.32
CD46-211ENST00000464082 DNAAF4Q8WXU2 420 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 ASPNQ9BXN1 380 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 STK31Q9BXU1 1019 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 HDAC8Q9BY41 377 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 VPS33BQ9H267 617 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 GREM2Q9H772 168 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 PODXL2Q9NZ53 605 aa6.79□□□□□ -1.32
CD46-211ENST00000464082 ZNF609O15014 1411 aa6.78□□□□□ -1.32
CD46-211ENST00000464082 SHTN1A0MZ66 631 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms