RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 NRCAMQ92823 1304 aa14.73□□□□□ -0.05
XRN1-203ENST00000463916 GUCD1Q96NT3 240 aa14.73□□□□□ -0.05
XRN1-203ENST00000463916 C22orf23Q9BZE7 217 aa14.73□□□□□ -0.05
XRN1-203ENST00000463916 ZBBXA8MT70 800 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 MSH4O15457 936 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 CXCL10P02778 98 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 STAT5BP51692 787 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 SETQ01105 290 aaPredicted RBP14.72□□□□□ -0.05
XRN1-203ENST00000463916 PPFIA1Q13136 1202 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 GRIK4Q16099 956 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 ZNF697Q5TEC3 545 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 GALNT17Q6IS24 598 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 RUFY4Q6ZNE9 571 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 SLC4A7Q9Y6M7 1214 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 TDP2O95551 362 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 GNAT1P11488 350 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 INSRRP14616 1297 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 RABGGTBP53611 331 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 PLCB4Q15147 1175 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 PLPPR4Q7Z2D5 763 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 CCDC60Q8IWA6 550 aaPredicted RBP14.72□□□□□ -0.05
XRN1-203ENST00000463916 FAM177A1Q8N128 213 aaPredicted RBP14.72□□□□□ -0.05
XRN1-203ENST00000463916 AZI2Q9H6S1 392 aa14.72□□□□□ -0.05
XRN1-203ENST00000463916 RSPH10B2B2RC85 870 aa14.71□□□□□ -0.05
XRN1-203ENST00000463916 CTSHP09668 335 aa14.71□□□□□ -0.05
XRN1-203ENST00000463916 RSPH10BP0C881 870 aa14.71□□□□□ -0.05
XRN1-203ENST00000463916 MYOGP15173 224 aa14.71□□□□□ -0.05
XRN1-203ENST00000463916 RBM25P49756 843 aaKnown RBP14.71□□□□□ -0.05
XRN1-203ENST00000463916 IGBP1P78318 339 aa14.71□□□□□ -0.05
XRN1-203ENST00000463916 INF2Q27J81 1249 aa14.71□□□□□ -0.05
XRN1-203ENST00000463916 EARS2Q5JPH6 523 aaKnown RBP14.71□□□□□ -0.05
XRN1-203ENST00000463916 TRAPPC12Q8WVT3 735 aa14.71□□□□□ -0.05
XRN1-203ENST00000463916 MTIF3Q9H2K0 278 aaKnown RBP14.71□□□□□ -0.05
XRN1-203ENST00000463916 TBC1D22BQ9NU19 505 aa14.71□□□□□ -0.05
XRN1-203ENST00000463916 LIMCH1Q9UPQ0 1083 aa14.71□□□□□ -0.05
XRN1-203ENST00000463916 YBX2Q9Y2T7 364 aaKnown RBP14.71□□□□□ -0.05
XRN1-203ENST00000463916 KAT6AQ92794 2004 aa14.71□□□□□ -0.06
XRN1-203ENST00000463916 CYP3A7-CYP3A51PA0A087WV96 503 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 MBLAC1A4D2B0 266 aaPredicted RBP14.7□□□□□ -0.06
XRN1-203ENST00000463916 ATP4AP20648 1035 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 CYP3A7P24462 503 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 SWSAP1Q6NVH7 229 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 TUBE1Q9UJT0 475 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 REV3LO60673 3130 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 GBF1Q92538 1859 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 ATP2A2P16615 1042 aaKnown RBP14.7□□□□□ -0.06
XRN1-203ENST00000463916 NR5A1Q13285 461 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 NONOQ15233 471 aaKnown RBP eCLIP14.7□□□□□ -0.06
XRN1-203ENST00000463916 TMCO2Q7Z6W1 182 aaPredicted RBP14.7□□□□□ -0.06
XRN1-203ENST00000463916 SLC5A5Q92911 643 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 TIFAQ96CG3 184 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 TRPC6Q9Y210 931 aa14.7□□□□□ -0.06
XRN1-203ENST00000463916 TRANK1O15050 2925 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 POTEB3A0JP26 581 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 FAM205CA6NFA0 338 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 BACH1O14867 736 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 PARNO95453 639 aaKnown RBP14.69□□□□□ -0.06
XRN1-203ENST00000463916 CHRNA1P02708 482 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 ACTN1P12814 892 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 FOSBP53539 338 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 Q4G0T1 1027 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 ZNF746Q6NUN9 644 aaPredicted RBP14.69□□□□□ -0.06
XRN1-203ENST00000463916 POTEBQ6S5H4 581 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 KRT25Q7Z3Z0 450 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 MBOAT7Q96N66 472 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 CDX2Q99626 313 aaPredicted RBP14.69□□□□□ -0.06
XRN1-203ENST00000463916 ZNF576Q9H609 170 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 SLC37A4O43826 429 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 XBP1P17861 261 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 GRIN2CQ14957 1233 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 MIS18BP1Q6P0N0 1132 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 PDXDC2PQ6P474 469 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 CNKSR3Q6P9H4 555 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 PIK3AP1Q6ZUJ8 805 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 CCDC83Q8IWF9 413 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 DBF4BQ8NFT6 615 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 DNAJB3Q8WWF6 145 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 WASF1Q92558 559 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 ZNF302Q9NR11 478 aa14.69□□□□□ -0.06
XRN1-203ENST00000463916 CCDC194A0A1B0GVG4 234 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 ZBTB42B2RXF5 422 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 WDR5P61964 334 aaKnown RBP14.68□□□□□ -0.06
XRN1-203ENST00000463916 DEFB103AP81534 67 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 KRT76Q01546 638 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 LETM2Q2VYF4 491 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 FAM26DQ5JW98 314 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 TRMT1LQ7Z2T5 733 aaKnown RBP14.68□□□□□ -0.06
XRN1-203ENST00000463916 RPAINQ86UA6 219 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 ETNPPLQ8TBG4 499 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 TNFRSF25Q93038 417 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 RIT2Q99578 217 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 NKX2-4Q9H2Z4 354 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 PCDHA10Q9Y5I2 948 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 MAFBQ9Y5Q3 323 aaPredicted RBP14.68□□□□□ -0.06
XRN1-203ENST00000463916 PTPRSQ13332 1948 aa14.68□□□□□ -0.06
XRN1-203ENST00000463916 CHMP2AO43633 222 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 CAND2O75155 1236 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 PSMD10O75832 226 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 BAIAP3O94812 1187 aa14.67□□□□□ -0.06
XRN1-203ENST00000463916 SLC26A2P50443 739 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms