RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 TRIM71Q2Q1W2 868 aaKnown RBP15.24■□□□□ 0.03
COMMD3-205ENST00000463688 FAM26DQ5JW98 314 aa15.24■□□□□ 0.03
COMMD3-205ENST00000463688 ZNF618Q5T7W0 954 aa15.24■□□□□ 0.03
COMMD3-205ENST00000463688 DAGLBQ8NCG7 672 aa15.24■□□□□ 0.03
COMMD3-205ENST00000463688 FAM161BQ96MY7 647 aa15.24■□□□□ 0.03
COMMD3-205ENST00000463688 PCDHA10Q9Y5I2 948 aa15.24■□□□□ 0.03
COMMD3-205ENST00000463688 SZT2Q5T011 3432 aa15.24■□□□□ 0.03
COMMD3-205ENST00000463688 COL1A2P08123 1366 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 MBLAC1A4D2B0 266 aaPredicted RBP15.23■□□□□ 0.03
COMMD3-205ENST00000463688 WDR64B1ANS9 1081 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 TREHO43280 583 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 GTPBP6O43824 516 aaPredicted RBP15.23■□□□□ 0.03
COMMD3-205ENST00000463688 PFKFB2O60825 505 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 DKC1O60832 514 aaKnown RBP eCLIP15.23■□□□□ 0.03
COMMD3-205ENST00000463688 GCFC2P16383 781 aaKnown RBP15.23■□□□□ 0.03
COMMD3-205ENST00000463688 JAK3P52333 1124 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 CDC42EP1Q00587 391 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 TRIM29Q14134 588 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 PRR16Q569H4 304 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 ZNF484Q5JVG2 852 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 CKAP2LQ8IYA6 745 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 BLIDQ8IZY5 108 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 LMBR1Q8WVP7 490 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 DHX38Q92620 1227 aaKnown RBP15.23■□□□□ 0.03
COMMD3-205ENST00000463688 GUCD1Q96NT3 240 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 RAD9AQ99638 391 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 FTHL17Q9BXU8 183 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 ZNF302Q9NR11 478 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 PKD2L1Q9P0L9 805 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 VPS54Q9P1Q0 977 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 INSL6Q9Y581 213 aa15.23■□□□□ 0.03
COMMD3-205ENST00000463688 CCDC194A0A1B0GVG4 234 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 POTEB3A0JP26 581 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 MAGEB2O15479 319 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 ARP10275 920 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 TMOD1P28289 359 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 ADAM17P78536 824 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 NONOQ15233 471 aaKnown RBP eCLIP15.22■□□□□ 0.03
COMMD3-205ENST00000463688 PDXDC2PQ6P474 469 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 POTEBQ6S5H4 581 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 EXOC8Q8IYI6 725 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 MAFAQ8NHW3 353 aaPredicted RBP15.22■□□□□ 0.03
COMMD3-205ENST00000463688 ATP8B4Q8TF62 1192 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 CRYGNQ8WXF5 182 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 SAMD11Q96NU1 681 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 CTAGE1Q96RT6 745 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 TTYH1Q9H313 450 aaPredicted RBP15.22■□□□□ 0.03
COMMD3-205ENST00000463688 NCOA5Q9HCD5 579 aaKnown RBP15.22■□□□□ 0.03
COMMD3-205ENST00000463688 NRBP2Q9NSY0 501 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 TMEM260Q9NX78 707 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 SAMM50Q9Y512 469 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 PCDHA2Q9Y5H9 948 aa15.22■□□□□ 0.03
COMMD3-205ENST00000463688 FAM86B1E9PN63 330 aa15.21■□□□□ 0.03
COMMD3-205ENST00000463688 FAM86B2P0C5J1 330 aa15.21■□□□□ 0.03
COMMD3-205ENST00000463688 MARK3P27448 753 aa15.21■□□□□ 0.03
COMMD3-205ENST00000463688 PLEKHG4Q58EX7 1191 aa15.21■□□□□ 0.03
COMMD3-205ENST00000463688 TRIM50Q86XT4 487 aa15.21■□□□□ 0.03
COMMD3-205ENST00000463688 CYP2W1Q8TAV3 490 aa15.21■□□□□ 0.03
COMMD3-205ENST00000463688 BBXQ8WY36 941 aaPredicted RBP15.21■□□□□ 0.03
COMMD3-205ENST00000463688 CYP3A7-CYP3A51PA0A087WV96 503 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 IGKV6D-21A0A0A0MT36 114 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 SMIM35A0A1B0GVV1 85 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 GAS7O60861 476 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 NBNO60934 754 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 INSRRP14616 1297 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 CYP3A7P24462 503 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 NEK4P51957 841 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 WDR5P61964 334 aaKnown RBP15.2■□□□□ 0.02
COMMD3-205ENST00000463688 ZNF200P98182 395 aaPredicted RBP15.2■□□□□ 0.02
COMMD3-205ENST00000463688 STK3Q13188 491 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 Q4G0T1 1027 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 ABHD15Q6UXT9 468 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 TEKT3Q9BXF9 490 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 IFIH1Q9BYX4 1025 aaKnown RBP15.2■□□□□ 0.02
COMMD3-205ENST00000463688 NKX2-4Q9H2Z4 354 aa15.2■□□□□ 0.02
COMMD3-205ENST00000463688 IGLV3-22A0A075B6J6 115 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 MARCH6O60337 910 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 GJB5O95377 273 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 ITGB3BPQ13352 177 aaPredicted RBP15.19■□□□□ 0.02
COMMD3-205ENST00000463688 GRIN2CQ14957 1233 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 SAFBQ15424 915 aaKnown RBP eCLIP15.19■□□□□ 0.02
COMMD3-205ENST00000463688 DBF4BQ8NFT6 615 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 TBCKQ8TEA7 893 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 SYMPKQ92797 1274 aaKnown RBP15.19■□□□□ 0.02
COMMD3-205ENST00000463688 PGBD1Q96JS3 809 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 ZSCAN31Q96LW9 406 aaPredicted RBP15.19■□□□□ 0.02
COMMD3-205ENST00000463688 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 JPH2Q9BR39 696 aaPredicted RBP15.19■□□□□ 0.02
COMMD3-205ENST00000463688 BCAS3Q9H6U6 928 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 LMCD1Q9NZU5 365 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 ORC3Q9UBD5 711 aaPredicted RBP15.19■□□□□ 0.02
COMMD3-205ENST00000463688 RWDD3Q9Y3V2 267 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 KIF3AQ9Y496 699 aa15.19■□□□□ 0.02
COMMD3-205ENST00000463688 GRXCR1A8MXD5 290 aa15.18■□□□□ 0.02
COMMD3-205ENST00000463688 BAG4O95429 457 aaKnown RBP15.18■□□□□ 0.02
COMMD3-205ENST00000463688 PBX2P40425 430 aa15.18■□□□□ 0.02
COMMD3-205ENST00000463688 MRPS6P82932 125 aaKnown RBP15.18■□□□□ 0.02
COMMD3-205ENST00000463688 SCRN1Q12765 414 aa15.18■□□□□ 0.02
COMMD3-205ENST00000463688 PLCB4Q15147 1175 aa15.18■□□□□ 0.02
COMMD3-205ENST00000463688 LRCH2Q5VUJ6 765 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms