RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 DNAJB1P25685 340 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 CBX2Q14781 532 aaPredicted RBP16.68■□□□□ 0.26
SMC1A-204ENST00000463684 GRM4Q14833 912 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 GRIK4Q16099 956 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 IER5Q5VY09 327 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 PCNX4Q63HM2 1172 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 ADGRD2Q7Z7M1 963 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 NPAS4Q8IUM7 802 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 MICAL1Q8TDZ2 1067 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 POF1BQ8WVV4 589 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 SEPT1Q8WYJ6 367 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 GLG1Q92896 1179 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 PHF7Q9BWX1 381 aaPredicted RBP16.68■□□□□ 0.26
SMC1A-204ENST00000463684 IRF2BPLQ9H1B7 796 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 ERAP1Q9NZ08 941 aa16.68■□□□□ 0.26
SMC1A-204ENST00000463684 MYH6P13533 1939 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 M0QZ92 97 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 MARK3P27448 753 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 CD52P31358 61 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 MRPS6P82932 125 aaKnown RBP16.67■□□□□ 0.26
SMC1A-204ENST00000463684 SIGLEC14Q08ET2 396 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 TCF15Q12870 199 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 SLC35G1Q2M3R5 365 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 PAN2Q504Q3 1202 aaKnown RBP16.67■□□□□ 0.26
SMC1A-204ENST00000463684 PIBF1Q8WXW3 757 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 CDHR1Q96JP9 859 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 RPGRIP1Q96KN7 1286 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 TLE6Q9H808 572 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 BARX2Q9UMQ3 279 aaPredicted RBP16.67■□□□□ 0.26
SMC1A-204ENST00000463684 USP15Q9Y4E8 981 aaPredicted RBP16.67■□□□□ 0.26
SMC1A-204ENST00000463684 SQORQ9Y6N5 450 aa16.67■□□□□ 0.26
SMC1A-204ENST00000463684 MBLAC1A4D2B0 266 aaPredicted RBP16.66■□□□□ 0.26
SMC1A-204ENST00000463684 RRN3P2A6NIE6 340 aa16.66■□□□□ 0.26
SMC1A-204ENST00000463684 IFIT3O14879 490 aaKnown RBP16.66■□□□□ 0.26
SMC1A-204ENST00000463684 CYTH3O43739 400 aa16.66■□□□□ 0.26
SMC1A-204ENST00000463684 PPFIA3O75145 1194 aa16.66■□□□□ 0.26
SMC1A-204ENST00000463684 IGBP1P78318 339 aa16.66■□□□□ 0.26
SMC1A-204ENST00000463684 RTN4RL1Q86UN2 441 aaPredicted RBP16.66■□□□□ 0.26
SMC1A-204ENST00000463684 TNPO1Q92973 898 aaKnown RBP16.66■□□□□ 0.26
SMC1A-204ENST00000463684 SMARCAD1Q9H4L7 1026 aa16.66■□□□□ 0.26
SMC1A-204ENST00000463684 AGO3Q9H9G7 860 aaKnown RBP16.66■□□□□ 0.26
SMC1A-204ENST00000463684 LRFN2Q9ULH4 789 aa16.66■□□□□ 0.26
SMC1A-204ENST00000463684 GFRA3O60609 400 aa16.65■□□□□ 0.26
SMC1A-204ENST00000463684 MARCH8Q5T0T0 291 aa16.65■□□□□ 0.26
SMC1A-204ENST00000463684 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
SMC1A-204ENST00000463684 USP17L6PQ6QN14 398 aa16.65■□□□□ 0.26
SMC1A-204ENST00000463684 LINC01599Q8WXQ3 324 aa16.65■□□□□ 0.26
SMC1A-204ENST00000463684 ATOH1Q92858 354 aaPredicted RBP16.65■□□□□ 0.26
SMC1A-204ENST00000463684 GPRASP2Q96D09 838 aa16.65■□□□□ 0.26
SMC1A-204ENST00000463684 FAM49AQ9H0Q0 323 aaPredicted RBP16.65■□□□□ 0.26
SMC1A-204ENST00000463684 OSBPL3Q9H4L5 887 aa16.65■□□□□ 0.26
SMC1A-204ENST00000463684 PCDHB12Q9Y5F1 795 aa16.65■□□□□ 0.26
SMC1A-204ENST00000463684 ZNF318Q5VUA4 2279 aa16.65■□□□□ 0.26
SMC1A-204ENST00000463684 GSTTP1A0A1W2PQM5 241 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 FSD2A1L4K1 749 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 ATP9AO75110 1047 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 GLP2RO95838 553 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 SCG2P13521 617 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 ATF7P17544 494 aaPredicted RBP16.64■□□□□ 0.25
SMC1A-204ENST00000463684 PAK2Q13177 524 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 WTAPQ15007 396 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 SART3Q15020 963 aaKnown RBP16.64■□□□□ 0.25
SMC1A-204ENST00000463684 SPOUT1Q5T280 376 aaKnown RBP16.64■□□□□ 0.25
SMC1A-204ENST00000463684 PLEKHM2Q8IWE5 1019 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 CRIPAKQ8N1N5 446 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 AAASQ9NRG9 546 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 PADI3Q9ULW8 664 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 MYO7AQ13402 2215 aa16.64■□□□□ 0.25
SMC1A-204ENST00000463684 PIK3CDO00329 1044 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 PER2O15055 1255 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 INSRRP14616 1297 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 KCNA2P16389 499 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 AVPR2P30518 371 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 UBE3AQ05086 875 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 TROAPQ12815 778 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 CATIPQ7Z7H3 387 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 RRP36Q96EU6 259 aaKnown RBP16.63■□□□□ 0.25
SMC1A-204ENST00000463684 NEK1Q96PY6 1258 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 FAM86C1Q9NVL1 165 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
SMC1A-204ENST00000463684 PCDHB7Q9Y5E2 793 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 TRPV2Q9Y5S1 764 aa16.63■□□□□ 0.25
SMC1A-204ENST00000463684 TECTAO75443 2155 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 LAMA4Q16363 1823 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 USP34Q70CQ2 3546 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 MEIS2O14770 477 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 SRGAP2BP0DMP2 458 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 IBSPP21815 317 aaPredicted RBP16.62■□□□□ 0.25
SMC1A-204ENST00000463684 TMEM62Q0P6H9 643 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 RALYLQ86SE5 291 aaKnown RBP16.62■□□□□ 0.25
SMC1A-204ENST00000463684 ZBTB33Q86T24 672 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 ASIC4Q96FT7 647 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 CDCA3Q99618 268 aaPredicted RBP16.62■□□□□ 0.25
SMC1A-204ENST00000463684 CELF4Q9BZC1 486 aaKnown RBP16.62■□□□□ 0.25
SMC1A-204ENST00000463684 RWDD1Q9H446 243 aaPredicted RBP16.62■□□□□ 0.25
SMC1A-204ENST00000463684 AZI2Q9H6S1 392 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 TLR9Q9NR96 1032 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 SEC63Q9UGP8 760 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms