RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 STAT5BP51692 787 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 PTK7Q13308 1070 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 GPNMBQ14956 572 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 PLCB4Q15147 1175 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 MARCH8Q5T0T0 291 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 LRCH2Q5VUJ6 765 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 SWSAP1Q6NVH7 229 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 SMAP1Q8IYB5 467 aaPredicted RBP20.01■□□□□ 0.79
VPS52-214ENST00000463486 LMBR1Q8WVP7 490 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 VAV3Q9UKW4 847 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 PCDHA10Q9Y5I2 948 aa20.01■□□□□ 0.79
VPS52-214ENST00000463486 MAFBQ9Y5Q3 323 aaPredicted RBP20.01■□□□□ 0.79
VPS52-214ENST00000463486 GAS7O60861 476 aa20■□□□□ 0.79
VPS52-214ENST00000463486 CCL23P55773 120 aa20■□□□□ 0.79
VPS52-214ENST00000463486 FPGSQ05932 587 aa20■□□□□ 0.79
VPS52-214ENST00000463486 SAFBQ15424 915 aaKnown RBP eCLIP20■□□□□ 0.79
VPS52-214ENST00000463486 C9orf50Q5SZB4 431 aa20■□□□□ 0.79
VPS52-214ENST00000463486 POTEDQ86YR6 584 aa20■□□□□ 0.79
VPS52-214ENST00000463486 NOSTRINQ8IVI9 506 aa20■□□□□ 0.79
VPS52-214ENST00000463486 SNX21Q969T3 373 aa20■□□□□ 0.79
VPS52-214ENST00000463486 FAM20AQ96MK3 541 aa20■□□□□ 0.79
VPS52-214ENST00000463486 NAP1L4Q99733 375 aaKnown RBP20■□□□□ 0.79
VPS52-214ENST00000463486 NRCAMQ92823 1304 aa20■□□□□ 0.79
VPS52-214ENST00000463486 MBLAC1A4D2B0 266 aaPredicted RBP19.99■□□□□ 0.79
VPS52-214ENST00000463486 RBAK-RBAKDNI3L0D1 243 aa19.99■□□□□ 0.79
VPS52-214ENST00000463486 TBX3O15119 743 aa19.99■□□□□ 0.79
VPS52-214ENST00000463486 SLC26A2P50443 739 aa19.99■□□□□ 0.79
VPS52-214ENST00000463486 MIS18BP1Q6P0N0 1132 aa19.99■□□□□ 0.79
VPS52-214ENST00000463486 ATP6V0A1Q93050 837 aa19.99■□□□□ 0.79
VPS52-214ENST00000463486 SCLYQ96I15 445 aa19.99■□□□□ 0.79
VPS52-214ENST00000463486 TEKT3Q9BXF9 490 aa19.99■□□□□ 0.79
VPS52-214ENST00000463486 AZI2Q9H6S1 392 aa19.99■□□□□ 0.79
VPS52-214ENST00000463486 DISC1Q9NRI5 854 aa19.99■□□□□ 0.79
VPS52-214ENST00000463486 WDR64B1ANS9 1081 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 ZBTB42B2RXF5 422 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 ZNF862O60290 1169 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 IQCF3P0C7M6 154 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 INSRRP14616 1297 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 SPIRE1Q08AE8 756 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 SHHQ15465 462 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 TDHQ8IZJ6 230 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 TMEM199Q8N511 208 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 CAGE1Q8TC20 777 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 MTMR9Q96QG7 549 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 ZNF302Q9NR11 478 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 SMC3Q9UQE7 1217 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 NOD1Q9Y239 953 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.98■□□□□ 0.79
VPS52-214ENST00000463486 IGSF9BQ9UPX0 1349 aa19.98■□□□□ 0.79
VPS52-214ENST00000463486 EML1O00423 815 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 PSAPP07602 524 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 CKBP12277 381 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 SFNP31947 248 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 TOB1P50616 345 aaPredicted RBP19.97■□□□□ 0.79
VPS52-214ENST00000463486 PPFIA1Q13136 1202 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 PPP2R5CQ13362 524 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 BFSP2Q13515 415 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 GRIK4Q16099 956 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 UGCGQ16739 394 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 TMEM240Q5SV17 173 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 ATP8B4Q8TF62 1192 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 ZBTB10Q96DT7 871 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.97■□□□□ 0.793e-8■■■□□ 16.3
VPS52-214ENST00000463486 TMEM60Q9H2L4 133 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 GABBR1Q9UBS5 961 aa19.97■□□□□ 0.79
VPS52-214ENST00000463486 POTEB3A0JP26 581 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 K7ELQ4 463 aaPredicted RBP19.96■□□□□ 0.79
VPS52-214ENST00000463486 BACH1O14867 736 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 CHMP2AO43633 222 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 STBD1O95210 358 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 ACRP10323 421 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 GNAT1P11488 350 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 JAK3P52333 1124 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 PPIGQ13427 754 aaKnown RBP eCLIP19.96■□□□□ 0.793e-7■■■□□ 18.6
VPS52-214ENST00000463486 MBTPS1Q14703 1052 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 RASIP1Q5U651 963 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 FAM160B1Q5W0V3 765 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 PDXDC2PQ6P474 469 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 POTEBQ6S5H4 581 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 RUFY4Q6ZNE9 571 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 RDM1Q8NG50 284 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 INTS4Q96HW7 963 aaKnown RBP19.96■□□□□ 0.79
VPS52-214ENST00000463486 IL23AQ9NPF7 189 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 KIF3AQ9Y496 699 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 WDR81Q562E7 1941 aa19.96■□□□□ 0.79
VPS52-214ENST00000463486 RRN3P2A6NIE6 340 aa19.95■□□□□ 0.78
VPS52-214ENST00000463486 SELPP16109 830 aa19.95■□□□□ 0.78
VPS52-214ENST00000463486 ZNF618Q5T7W0 954 aa19.95■□□□□ 0.78
VPS52-214ENST00000463486 RPAINQ86UA6 219 aa19.95■□□□□ 0.78
VPS52-214ENST00000463486 C4orf32Q8N8J7 132 aa19.95■□□□□ 0.78
VPS52-214ENST00000463486 TRAPPC12Q8WVT3 735 aa19.95■□□□□ 0.78
VPS52-214ENST00000463486 SCN5AQ14524 2016 aa19.95■□□□□ 0.78
VPS52-214ENST00000463486 TET1Q8NFU7 2136 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 ATP2B1P20020 1258 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 TRAPPC10P48553 1259 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 LRIT3Q3SXY7 679 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 LARP1BQ659C4 914 aaKnown RBP19.94■□□□□ 0.78
VPS52-214ENST00000463486 ZNF365Q70YC5 407 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 MIER3Q7Z3K6 550 aa19.94■□□□□ 0.78
VPS52-214ENST00000463486 SLFN12Q8IYM2 578 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms