RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 CCNE2O96020 404 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 SLC26A2P50443 739 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 GPNMBQ14956 572 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 ZNF746Q6NUN9 644 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-202ENST00000463440 MIS18BP1Q6P0N0 1132 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 TAF2Q6P1X5 1199 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 CNKSR3Q6P9H4 555 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 ABHD15Q6UXT9 468 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 KRT25Q7Z3Z0 450 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 UIMC1Q96RL1 719 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 SLC9A7Q96T83 725 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 PHF20Q9BVI0 1012 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 TTYH1Q9H313 450 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-202ENST00000463440 KCNJ14Q9UNX9 436 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 TRPC6Q9Y210 931 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 STXBP5LQ9Y2K9 1186 aa18.41■□□□□ 0.54
COL1A1-202ENST00000463440 TET1Q8NFU7 2136 aa18.4■□□□□ 0.54
COL1A1-202ENST00000463440 IGKV6D-21A0A0A0MT36 114 aa18.4■□□□□ 0.54
COL1A1-202ENST00000463440 PBX2P40425 430 aa18.4■□□□□ 0.54
COL1A1-202ENST00000463440 KCNJ6P48051 423 aa18.4■□□□□ 0.54
COL1A1-202ENST00000463440 KRT76Q01546 638 aa18.4■□□□□ 0.54
COL1A1-202ENST00000463440 NONOQ15233 471 aaKnown RBP eCLIP18.4■□□□□ 0.54
COL1A1-202ENST00000463440 NPY5RQ15761 445 aa18.4■□□□□ 0.54
COL1A1-202ENST00000463440 RSPH3Q86UC2 560 aa18.4■□□□□ 0.54
COL1A1-202ENST00000463440 LENG9Q96B70 501 aa18.4■□□□□ 0.54
COL1A1-202ENST00000463440 GUCD1Q96NT3 240 aa18.4■□□□□ 0.54
COL1A1-202ENST00000463440 TUBE1Q9UJT0 475 aa18.4■□□□□ 0.54
COL1A1-202ENST00000463440 CCDC194A0A1B0GVG4 234 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 POTEB3A0JP26 581 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 EFCAB14O75071 495 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 CTSHP09668 335 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 INSRRP14616 1297 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 IGBP1P78318 339 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 MBTPS1Q14703 1052 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 PLCB4Q15147 1175 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 POTEBQ6S5H4 581 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 SMAP1Q8IYB5 467 aaPredicted RBP18.39■□□□□ 0.53
COL1A1-202ENST00000463440 PHOSPHO2Q8TCD6 241 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 ZNF576Q9H609 170 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 ZNF302Q9NR11 478 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 LIMCH1Q9UPQ0 1083 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 PCDHA11Q9Y5I1 949 aa18.39■□□□□ 0.53
COL1A1-202ENST00000463440 ABHD14A-ACY1A0A1B0GW23 586 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 MBLAC1A4D2B0 266 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-202ENST00000463440 MSH4O15457 936 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 EDIL3O43854 480 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 DTNBO60941 627 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 RPLP2P05387 115 aaKnown RBP18.38■□□□□ 0.53
COL1A1-202ENST00000463440 PSAPP07602 524 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 IKBKEQ14164 716 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 Q4G0T1 1027 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 SWSAP1Q6NVH7 229 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 PDXDC2PQ6P474 469 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 MOXD1Q6UVY6 613 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 RUFY4Q6ZNE9 571 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 RPAINQ86UA6 219 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 NSUN7Q8NE18 718 aaKnown RBP18.38■□□□□ 0.53
COL1A1-202ENST00000463440 RIT2Q99578 217 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 CDX2Q99626 313 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-202ENST00000463440 SAMM50Q9Y512 469 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 PCDHA10Q9Y5I2 948 aa18.38■□□□□ 0.53
COL1A1-202ENST00000463440 CYP3A7-CYP3A51PA0A087WV96 503 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 KIF28PB7ZC32 967 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 HBP1O60381 514 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 GAS7O60861 476 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 FDPSP14324 419 aaKnown RBP18.37■□□□□ 0.53
COL1A1-202ENST00000463440 CYP3A7P24462 503 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 RABGGTBP53611 331 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 INF2Q27J81 1249 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 FAM26DQ5JW98 314 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 MARCH8Q5T0T0 291 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 CCDC60Q8IWA6 550 aaPredicted RBP18.37■□□□□ 0.53
COL1A1-202ENST00000463440 TEKT3Q9BXF9 490 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 NKX2-4Q9H2Z4 354 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 SLC28A3Q9HAS3 691 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 BRMS1Q9HCU9 246 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 GJB4Q9NTQ9 266 aa18.37■□□□□ 0.53
COL1A1-202ENST00000463440 WDR64B1ANS9 1081 aa18.36■□□□□ 0.53
COL1A1-202ENST00000463440 TDP2O95551 362 aa18.36■□□□□ 0.53
COL1A1-202ENST00000463440 WDR5P61964 334 aaKnown RBP18.36■□□□□ 0.53
COL1A1-202ENST00000463440 PLEKHG4Q58EX7 1191 aa18.36■□□□□ 0.53
COL1A1-202ENST00000463440 LRCH2Q5VUJ6 765 aa18.36■□□□□ 0.53
COL1A1-202ENST00000463440 HERC6Q8IVU3 1022 aa18.36■□□□□ 0.53
COL1A1-202ENST00000463440 CKAP2LQ8IYA6 745 aa18.36■□□□□ 0.53
COL1A1-202ENST00000463440 ATP8B4Q8TF62 1192 aa18.36■□□□□ 0.53
COL1A1-202ENST00000463440 SLC5A5Q92911 643 aa18.36■□□□□ 0.53
COL1A1-202ENST00000463440 UPF2Q9HAU5 1272 aaKnown RBP18.36■□□□□ 0.53
COL1A1-202ENST00000463440 YBX2Q9Y2T7 364 aaKnown RBP18.36■□□□□ 0.53
COL1A1-202ENST00000463440 KRT2P35908 639 aa18.35■□□□□ 0.53
COL1A1-202ENST00000463440 RBM25P49756 843 aaKnown RBP18.35■□□□□ 0.53
COL1A1-202ENST00000463440 TRIM29Q14134 588 aa18.35■□□□□ 0.53
COL1A1-202ENST00000463440 LETM2Q2VYF4 491 aa18.35■□□□□ 0.53
COL1A1-202ENST00000463440 NEK8Q86SG6 692 aa18.35■□□□□ 0.53
COL1A1-202ENST00000463440 DBF4BQ8NFT6 615 aa18.35■□□□□ 0.53
COL1A1-202ENST00000463440 DNAJB3Q8WWF6 145 aa18.35■□□□□ 0.53
COL1A1-202ENST00000463440 SEPT8Q92599 483 aa18.35■□□□□ 0.53
COL1A1-202ENST00000463440 ZSCAN31Q96LW9 406 aaPredicted RBP18.35■□□□□ 0.53
COL1A1-202ENST00000463440 MBOAT7Q96N66 472 aa18.35■□□□□ 0.53
COL1A1-202ENST00000463440 KIF2CQ99661 725 aa18.35■□□□□ 0.53
COL1A1-202ENST00000463440 NAP1L4Q99733 375 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms