RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 HIDE1A8MVS5 230 aa15.77■□□□□ 0.12
C9orf3-211ENST00000463372 HOXC8P31273 242 aa15.77■□□□□ 0.12
C9orf3-211ENST00000463372 NONOQ15233 471 aaKnown RBP eCLIP15.77■□□□□ 0.12
C9orf3-211ENST00000463372 IL31Q6EBC2 164 aa15.77■□□□□ 0.12
C9orf3-211ENST00000463372 CLEC4DQ8WXI8 215 aa15.77■□□□□ 0.12
C9orf3-211ENST00000463372 RANBP17Q9H2T7 1088 aaKnown RBP15.77■□□□□ 0.12
C9orf3-211ENST00000463372 RNPEPQ9H4A4 650 aa15.77■□□□□ 0.12
C9orf3-211ENST00000463372 EHMT1Q9H9B1 1298 aa15.77■□□□□ 0.12
C9orf3-211ENST00000463372 SPATA6Q9NWH7 488 aaPredicted RBP15.77■□□□□ 0.12
C9orf3-211ENST00000463372 LRFN2Q9ULH4 789 aa15.77■□□□□ 0.12
C9orf3-211ENST00000463372 NOB1Q9ULX3 412 aaKnown RBP15.77■□□□□ 0.12
C9orf3-211ENST00000463372 TAF4O00268 1085 aa15.76■□□□□ 0.11
C9orf3-211ENST00000463372 GOLIM4O00461 696 aa15.76■□□□□ 0.11
C9orf3-211ENST00000463372 CHRNA1P02708 482 aa15.76■□□□□ 0.11
C9orf3-211ENST00000463372 HOXD8P13378 290 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-211ENST00000463372 CSTF1Q05048 431 aaKnown RBP15.76■□□□□ 0.11
C9orf3-211ENST00000463372 LPIN1Q14693 890 aa15.76■□□□□ 0.11
C9orf3-211ENST00000463372 STXBP2Q15833 593 aa15.76■□□□□ 0.11
C9orf3-211ENST00000463372 ZSCAN32Q9NX65 697 aa15.76■□□□□ 0.11
C9orf3-211ENST00000463372 RAB23Q9ULC3 237 aa15.76■□□□□ 0.11
C9orf3-211ENST00000463372 LZTS1Q9Y250 596 aa15.76■□□□□ 0.11
C9orf3-211ENST00000463372 MRVI1Q9Y6F6 885 aa15.76■□□□□ 0.11
C9orf3-211ENST00000463372 SRRM3A6NNA2 597 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-211ENST00000463372 MINDY4BA8MYZ0 360 aa15.75■□□□□ 0.11
C9orf3-211ENST00000463372 H3BRB1 525 aa15.75■□□□□ 0.11
C9orf3-211ENST00000463372 TSPY3P0CV98 308 aa15.75■□□□□ 0.11
C9orf3-211ENST00000463372 TSPY8P0CW00 308 aa15.75■□□□□ 0.11
C9orf3-211ENST00000463372 GATMP50440 423 aa15.75■□□□□ 0.11
C9orf3-211ENST00000463372 CCDC149Q6ZUS6 474 aa15.75■□□□□ 0.11
C9orf3-211ENST00000463372 ZBTB44Q8NCP5 570 aa15.75■□□□□ 0.11
C9orf3-211ENST00000463372 MRPS27Q92552 414 aaKnown RBP15.75■□□□□ 0.11
C9orf3-211ENST00000463372 SPATA33Q96N06 139 aa15.75■□□□□ 0.11
C9orf3-211ENST00000463372 DNAJC2Q99543 621 aaKnown RBP15.75■□□□□ 0.11
C9orf3-211ENST00000463372 C16orf70Q9BSU1 422 aa15.75■□□□□ 0.11
C9orf3-211ENST00000463372 TUT1Q9H6E5 874 aaKnown RBP15.75■□□□□ 0.11
C9orf3-211ENST00000463372 PNMA2Q9UL42 364 aa15.75■□□□□ 0.11
C9orf3-211ENST00000463372 TMEM8BA6NDV4 472 aa15.74■□□□□ 0.11
C9orf3-211ENST00000463372 PRDM1O75626 825 aa15.74■□□□□ 0.11
C9orf3-211ENST00000463372 SBK1Q52WX2 424 aa15.74■□□□□ 0.11
C9orf3-211ENST00000463372 TMC7Q7Z402 723 aa15.74■□□□□ 0.11
C9orf3-211ENST00000463372 C12orf76Q8N812 135 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-211ENST00000463372 PJA1Q8NG27 643 aa15.74■□□□□ 0.11
C9orf3-211ENST00000463372 FTHL17Q9BXU8 183 aa15.74■□□□□ 0.11
C9orf3-211ENST00000463372 SETD4Q9NVD3 440 aa15.74■□□□□ 0.11
C9orf3-211ENST00000463372 C2orf16Q68DN1 1984 aa15.74■□□□□ 0.11
C9orf3-211ENST00000463372 LILRB5O75023 590 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 LRP3O75074 770 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 GLULP15104 373 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 ADD2P35612 726 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 CCDC96Q2M329 555 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 SLFNL1Q499Z3 407 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 CCDC184Q52MB2 194 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 TSHZ1Q6ZSZ6 1077 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 RASGRP2Q7LDG7 609 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 COLGALT1Q8NBJ5 622 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 NSUN6Q8TEA1 469 aaKnown RBP15.73■□□□□ 0.11
C9orf3-211ENST00000463372 LINC01599Q8WXQ3 324 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 KIF12Q96FN5 646 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 BCO2Q9BYV7 579 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 ARHGEF3Q9NR81 526 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 DZANK1Q9NVP4 752 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 MTMR7Q9Y216 660 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 DMXL2Q8TDJ6 3036 aa15.73■□□□□ 0.11
C9orf3-211ENST00000463372 LOC400499M0QZD8 3231 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 SORBS3O60504 671 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 SRFP11831 508 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 SCG2P13521 617 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 POLA2Q14181 598 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 HSDL1Q3SXM5 330 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 MYSM1Q5VVJ2 828 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 RSPH3Q86UC2 560 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 AACSQ86V21 672 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 IWS1Q96ST2 819 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.72■□□□□ 0.11
C9orf3-211ENST00000463372 ANKFY1Q9P2R3 1169 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 ITPR1Q14643 2758 aa15.72■□□□□ 0.11
C9orf3-211ENST00000463372 IBSPP21815 317 aaPredicted RBP15.71■□□□□ 0.11
C9orf3-211ENST00000463372 SLC16A2P36021 539 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 RBM25P49756 843 aaKnown RBP15.71■□□□□ 0.11
C9orf3-211ENST00000463372 ARHGAP4P98171 946 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 PLCB3Q01970 1234 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 SMC1AQ14683 1233 aaKnown RBP15.71■□□□□ 0.11
C9orf3-211ENST00000463372 PPP4R3BQ5MIZ7 849 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 FBXO47Q5MNV8 452 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 SYDE2Q5VT97 1194 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 LAIR1Q6GTX8 287 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 KANK3Q6NY19 840 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 PRR23CQ6ZRP0 262 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 RTN4RL1Q86UN2 441 aaPredicted RBP15.71■□□□□ 0.11
C9orf3-211ENST00000463372 NEDD1Q8NHV4 660 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 GPR152Q8TDT2 470 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 FOXQ1Q9C009 403 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 PLIN4Q96Q06 1357 aa15.71■□□□□ 0.11
C9orf3-211ENST00000463372 IGSF10Q6WRI0 2623 aa15.7■□□□□ 0.1
C9orf3-211ENST00000463372 TBKBP1A7MCY6 615 aa15.7■□□□□ 0.1
C9orf3-211ENST00000463372 CLASP2O75122 1294 aaKnown RBP15.7■□□□□ 0.1
C9orf3-211ENST00000463372 EIF3JO75822 258 aaKnown RBP15.7■□□□□ 0.1
C9orf3-211ENST00000463372 CA8P35219 290 aa15.7■□□□□ 0.1
C9orf3-211ENST00000463372 KRT17Q04695 432 aa15.7■□□□□ 0.1
C9orf3-211ENST00000463372 CELF3Q5SZQ8 465 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms