RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ATP9AO75110 1047 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 PRPF6O94906 941 aaKnown RBP14.19□□□□□ -0.14
VAPB-203ENST00000463370 DSG3P32926 999 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 FKBP3Q00688 224 aaKnown RBP14.19□□□□□ -0.14
VAPB-203ENST00000463370 VGLL4Q14135 290 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 NAA30Q147X3 362 aaPredicted RBP14.19□□□□□ -0.14
VAPB-203ENST00000463370 EPHA7Q15375 998 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 EPM2AIP1Q7L775 607 aaPredicted RBP14.19□□□□□ -0.14
VAPB-203ENST00000463370 ERGIC2Q96RQ1 377 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 RIT2Q99578 217 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 DNAJC7Q99615 494 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 PDCD2LQ9BRP1 358 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 PXMP2Q9NR77 195 aa14.19□□□□□ -0.14
VAPB-203ENST00000463370 LUC7L2Q9Y383 392 aaKnown RBP14.19□□□□□ -0.14
VAPB-203ENST00000463370 BCRP11274 1271 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 TRIM21P19474 475 aaKnown RBP14.18□□□□□ -0.14
VAPB-203ENST00000463370 MTMR1Q13613 665 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 WDR24Q96S15 920 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 JADE2Q9NQC1 790 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 ADAMTS5Q9UNA0 930 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 SIK3Q9Y2K2 1263 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 PPP2R3BQ9Y5P8 575 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 SNCAIPQ9Y6H5 919 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 RBBP6Q7Z6E9 1792 aaKnown RBP14.18□□□□□ -0.14
VAPB-203ENST00000463370 CTIFO43310 598 aaKnown RBP14.18□□□□□ -0.14
VAPB-203ENST00000463370 MAN2A1Q16706 1144 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 SUPT20HL1Q3ZLR7 823 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 NOL9Q5SY16 702 aaKnown RBP14.18□□□□□ -0.14
VAPB-203ENST00000463370 FOXR2Q6PJQ5 311 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 CATSPERGQ6ZRH7 1159 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 KRT26Q7Z3Y9 468 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 OR8K1Q8NGG5 319 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 PCMTD1Q96MG8 357 aaPredicted RBP14.18□□□□□ -0.14
VAPB-203ENST00000463370 SYT17Q9BSW7 474 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 LZTFL1Q9NQ48 299 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 COL4A3BPQ9Y5P4 624 aa14.18□□□□□ -0.14
VAPB-203ENST00000463370 KIF2AO00139 706 aaPredicted RBP14.17□□□□□ -0.14
VAPB-203ENST00000463370 CCDC175P0C221 793 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 COG2Q14746 738 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 TMTC1Q8IUR5 882 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 GPIHBP1Q8IV16 184 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 ZNF710Q8N1W2 664 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 SMCR8Q8TEV9 937 aaPredicted RBP14.17□□□□□ -0.14
VAPB-203ENST00000463370 SH2D3AQ9BRG2 576 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 FAM207AQ9NSI2 230 aaPredicted RBP14.17□□□□□ -0.14
VAPB-203ENST00000463370 TMEM150BA6NC51 233 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 SPDYE16A6NNV3 312 aaPredicted RBP14.17□□□□□ -0.14
VAPB-203ENST00000463370 C19orf81C9J6K1 198 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 TBCAO75347 108 aaKnown RBP14.17□□□□□ -0.14
VAPB-203ENST00000463370 NMT1P30419 496 aaKnown RBP14.17□□□□□ -0.14
VAPB-203ENST00000463370 HOXA7P31268 230 aaPredicted RBP14.17□□□□□ -0.14
VAPB-203ENST00000463370 FKBP15Q5T1M5 1219 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 TREML2Q5T2D2 321 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 CYP26C1Q6V0L0 522 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 NIPA1Q7RTP0 329 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 MIER3Q7Z3K6 550 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 KSR1Q8IVT5 923 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 LRRN4CLQ8ND94 238 aa14.17□□□□□ -0.14
VAPB-203ENST00000463370 ADARB2Q9NS39 739 aaKnown RBP14.17□□□□□ -0.14
VAPB-203ENST00000463370 REXO2Q9Y3B8 237 aaKnown RBP14.17□□□□□ -0.14
VAPB-203ENST00000463370 GCNT3O95395 438 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 FGFR1OPO95684 399 aaKnown RBP14.16□□□□□ -0.14
VAPB-203ENST00000463370 ADAM9Q13443 819 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 KNOP1Q1ED39 458 aaKnown RBP14.16□□□□□ -0.14
VAPB-203ENST00000463370 CCDC40Q4G0X9 1142 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 ZC2HC1CQ53FD0 456 aaPredicted RBP14.16□□□□□ -0.14
VAPB-203ENST00000463370 ARHGEF16Q5VV41 709 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 ZC3H3Q8IXZ2 948 aaKnown RBP14.16□□□□□ -0.14
VAPB-203ENST00000463370 NACC1Q96RE7 527 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 FIZ1Q96SL8 496 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 MAP3K20Q9NYL2 800 aaKnown RBP14.16□□□□□ -0.14
VAPB-203ENST00000463370 RLFQ13129 1914 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 TESPA1A2RU30 521 aaPredicted RBP14.16□□□□□ -0.14
VAPB-203ENST00000463370 GNG11P61952 73 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 APBA1Q02410 837 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 KCNMA1Q12791 1236 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 UGCGQ16739 394 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 TRMT1LQ7Z2T5 733 aaKnown RBP14.16□□□□□ -0.14
VAPB-203ENST00000463370 MYCT1Q8N699 235 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 TMOD4Q9NZQ9 345 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 ZNF215Q9UL58 517 aaPredicted RBP14.16□□□□□ -0.14
VAPB-203ENST00000463370 TELO2Q9Y4R8 837 aa14.16□□□□□ -0.14
VAPB-203ENST00000463370 ASTN1O14525 1302 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 CCNE2O96020 404 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 FDX1P10109 184 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 NR2F2P24468 414 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 PLS1Q14651 629 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 C9orf131Q5VYM1 1079 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 MOB2Q70IA6 237 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 MAEAQ7L5Y9 396 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 TRIM59Q8IWR1 403 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 DAW1Q8N136 415 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 CEP63Q96MT8 703 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 MMRN2Q9H8L6 949 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 OLFML3Q9NRN5 406 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 TFR2Q9UP52 801 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 TRAF3IP3Q9Y228 551 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 SAMM50Q9Y512 469 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 PHIPQ8WWQ0 1821 aa14.15□□□□□ -0.14
VAPB-203ENST00000463370 PHLPP2Q6ZVD8 1323 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms