RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 IL17RAQ96F46 866 aa9.03□□□□□ -0.96
SMC3-202ENST00000462899 RMDN3Q96TC7 470 aa9.03□□□□□ -0.96
SMC3-202ENST00000462899 IFIH1Q9BYX4 1025 aaKnown RBP9.03□□□□□ -0.96
SMC3-202ENST00000462899 CPVLQ9H3G5 476 aa9.03□□□□□ -0.96
SMC3-202ENST00000462899 SEPT9Q9UHD8 586 aaPredicted RBP9.03□□□□□ -0.96
SMC3-202ENST00000462899 RWDD3Q9Y3V2 267 aa9.03□□□□□ -0.96
SMC3-202ENST00000462899 BAZ2BQ9UIF8 2168 aaKnown RBP9.03□□□□□ -0.96
SMC3-202ENST00000462899 EP300Q09472 2414 aaPredicted RBP9.03□□□□□ -0.96
SMC3-202ENST00000462899 CEP250Q9BV73 2442 aa9.03□□□□□ -0.96
SMC3-202ENST00000462899 TTC41PQ6P2S7 1318 aa9.03□□□□□ -0.96
SMC3-202ENST00000462899 SALL3Q9BXA9 1300 aa9.03□□□□□ -0.96
SMC3-202ENST00000462899 FANCMQ8IYD8 2048 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 C17orf102A2RUQ5 167 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 NR3C2P08235 984 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 SMIM10L2AP0DMW4 78 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 SMIM10L2BP0DMW5 78 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 MS4A1P11836 297 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 EIF2AK2P19525 551 aaKnown RBP9.02□□□□□ -0.97
SMC3-202ENST00000462899 UBA1P22314 1058 aaKnown RBP9.02□□□□□ -0.97
SMC3-202ENST00000462899 HSD17B4P51659 736 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 MGAT3Q09327 533 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 CDC37Q16543 378 aaPredicted RBP9.02□□□□□ -0.97
SMC3-202ENST00000462899 GPATCH4Q5T3I0 446 aaKnown RBP9.02□□□□□ -0.97
SMC3-202ENST00000462899 ASCL5Q7RTU5 278 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 SUGP1Q8IWZ8 645 aaKnown RBP9.02□□□□□ -0.97
SMC3-202ENST00000462899 DHX37Q8IY37 1157 aaKnown RBP9.02□□□□□ -0.97
SMC3-202ENST00000462899 EFHBQ8N7U6 833 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 SUSD6Q92537 303 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 ATP6V0A1Q93050 837 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 P2RX5Q93086 422 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 TTC14Q96N46 770 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 PDCD2LQ9BRP1 358 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 PLVAPQ9BX97 442 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 SLC4A5Q9BY07 1137 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 RNPEPQ9H4A4 650 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 DCTPP1Q9H773 170 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 EHMT1Q9H9B1 1298 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 PLAGL2Q9UPG8 496 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 MRVI1Q9Y6F6 885 aa9.02□□□□□ -0.97
SMC3-202ENST00000462899 PRR23AA6NEV1 266 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 H3BRB1 525 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 GGPS1O95749 300 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 LGALS2P05162 132 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 CTSHP09668 335 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 GOLGA8HP0CJ92 632 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 FECHP22830 423 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 AVPR2P30518 371 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 ICAM3P32942 547 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 NBL1P41271 181 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 QRICH1Q2TAL8 776 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 STOX1Q6ZVD7 989 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 IL31RAQ8NI17 732 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 LINC01599Q8WXQ3 324 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 GPKOWQ92917 476 aaPredicted RBP eCLIP9.01□□□□□ -0.971e-6■■■■□ 20.2
SMC3-202ENST00000462899 GPATCH3Q96I76 525 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 FSD1Q9BTV5 496 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 TUT1Q9H6E5 874 aaKnown RBP9.01□□□□□ -0.97
SMC3-202ENST00000462899 BCAS3Q9H6U6 928 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 USP15Q9Y4E8 981 aaPredicted RBP9.01□□□□□ -0.97
SMC3-202ENST00000462899 CFAP47Q6ZTR5 3102 aa9.01□□□□□ -0.97
SMC3-202ENST00000462899 OTOGLQ3ZCN5 2332 aa9□□□□□ -0.97
SMC3-202ENST00000462899 DGKIO75912 1065 aa9□□□□□ -0.97
SMC3-202ENST00000462899 FGAP02671 866 aa9□□□□□ -0.97
SMC3-202ENST00000462899 CHRNA1P02708 482 aa9□□□□□ -0.97
SMC3-202ENST00000462899 ITGB1P05556 798 aa9□□□□□ -0.97
SMC3-202ENST00000462899 ATF7P17544 494 aaPredicted RBP9□□□□□ -0.97
SMC3-202ENST00000462899 NDUFV1P49821 464 aa9□□□□□ -0.97
SMC3-202ENST00000462899 KCNC3Q14003 757 aa9□□□□□ -0.97
SMC3-202ENST00000462899 ARHGEF16Q5VV41 709 aa9□□□□□ -0.97
SMC3-202ENST00000462899 KCNV1Q6PIU1 500 aa9□□□□□ -0.97
SMC3-202ENST00000462899 ERMP1Q7Z2K6 904 aa9□□□□□ -0.97
SMC3-202ENST00000462899 VSIG10LQ86VR7 867 aa9□□□□□ -0.97
SMC3-202ENST00000462899 MCF2L2Q86YR7 1114 aa9□□□□□ -0.97
SMC3-202ENST00000462899 ADGRF4Q8IZF3 695 aa9□□□□□ -0.97
SMC3-202ENST00000462899 VN1R2Q8NFZ6 395 aa9□□□□□ -0.97
SMC3-202ENST00000462899 SPPL3Q8TCT6 385 aa9□□□□□ -0.97
SMC3-202ENST00000462899 OTUD7AQ8TE49 926 aaPredicted RBP9□□□□□ -0.97
SMC3-202ENST00000462899 ATP8B4Q8TF62 1192 aa9□□□□□ -0.97
SMC3-202ENST00000462899 MTMR8Q96EF0 704 aa9□□□□□ -0.97
SMC3-202ENST00000462899 SPATA33Q96N06 139 aa9□□□□□ -0.97
SMC3-202ENST00000462899 PHF7Q9BWX1 381 aaPredicted RBP9□□□□□ -0.97
SMC3-202ENST00000462899 UBA5Q9GZZ9 404 aa9□□□□□ -0.97
SMC3-202ENST00000462899 IRF2BPLQ9H1B7 796 aa9□□□□□ -0.97
SMC3-202ENST00000462899 IGFLR1Q9H665 355 aa9□□□□□ -0.97
SMC3-202ENST00000462899 RABGEF1Q9UJ41 708 aa9□□□□□ -0.97
SMC3-202ENST00000462899 BARX2Q9UMQ3 279 aaPredicted RBP9□□□□□ -0.97
SMC3-202ENST00000462899 TPRP12270 2363 aaKnown RBP9□□□□□ -0.97
SMC3-202ENST00000462899 FRMPD4Q14CM0 1322 aa9□□□□□ -0.97
SMC3-202ENST00000462899 CCDC171Q6TFL3 1326 aa9□□□□□ -0.97
SMC3-202ENST00000462899 BHMG1C9JSJ3 638 aaPredicted RBP8.99□□□□□ -0.97
SMC3-202ENST00000462899 H0Y858 1186 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 ENPP3O14638 875 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 PPP1R11O60927 126 aaPredicted RBP8.99□□□□□ -0.97
SMC3-202ENST00000462899 PDGFBP01127 241 aaPredicted RBP8.99□□□□□ -0.97
SMC3-202ENST00000462899 TGFB3P10600 412 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 HSPD1P10809 573 aaKnown RBP8.99□□□□□ -0.97
SMC3-202ENST00000462899 MMRN1Q13201 1228 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 SEMA3FQ13275 785 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 LPIN1Q14693 890 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 PGM5Q15124 567 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms