RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 ANO6Q4KMQ2 910 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 IFIT1BQ5T764 474 aaKnown RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 ANKRD34AQ69YU3 496 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 PGM2L1Q6PCE3 622 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 PTRH1Q86Y79 214 aaKnown RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 RIOX2Q8IUF8 465 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 KIAA1958Q8N8K9 716 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 LINC00116Q8NCU8 138 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 ZNF417Q8TAU3 575 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 NUDT8Q8WV74 236 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 HOXB13Q92826 284 aaPredicted RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 MAML3Q96JK9 1138 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 RIPOR3Q96MK2 946 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 ZNF587Q96SQ5 575 aaPredicted RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 TMEM120AQ9BXJ8 343 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 PRDM10Q9NQV6 1147 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 SAP30BPQ9UHR5 308 aaKnown RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 LRRFIP2Q9Y608 721 aaKnown RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 SETD1BQ9UPS6 1966 aaKnown RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 USP19O94966 1318 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 POLD1P28340 1107 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 HTRA4P83105 476 aaPredicted RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 KRT76Q01546 638 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 PPP2R5DQ14738 602 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 MUM1Q2TAK8 710 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 PDXDC1Q6P996 788 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 LINC00114Q6XXX2 140 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 DENND1CQ8IV53 801 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 PPHLN1Q8NEY8 458 aaKnown RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 PPP1R35Q8TAP8 253 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 FOXRED1Q96CU9 486 aaPredicted RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 ALG1Q9BT22 464 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 CRB3Q9BUF7 120 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 C22orf23Q9BZE7 217 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 PPARGC1AQ9UBK2 798 aaKnown RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 MRFAP1Q9Y605 127 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 FAM47E-STBD1D6RA91 191 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 NCAM2O15394 837 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 SLC26A4O43511 780 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 ZNF500O60304 480 aaPredicted RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 PIK3CBP42338 1070 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 LSAMPQ13449 338 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 POLD3Q15054 466 aaPredicted RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 ANO1Q5XXA6 986 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 PPP4R3AQ6IN85 833 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 CCDC174Q6PII3 467 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 APOA5Q6Q788 366 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 NPNTQ6UXI9 565 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 RTN4RL1Q86UN2 441 aaPredicted RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 TMEM52Q8NDY8 209 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 TMEM41AQ96HV5 264 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 NSFL1CQ9UNZ2 370 aaKnown RBP3.74□□□□□ -1.81
SMC4-203ENST00000462668 INVSQ9Y283 1065 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 ZNF652Q9Y2D9 606 aa3.74□□□□□ -1.81
SMC4-203ENST00000462668 A0A087WV62 115 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 A0A0A0MRY4 1105 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 SLC12A8A0AV02 714 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 PRSS47A8MTI9 375 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 RBAK-RBAKDNI3L0D1 243 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 MYO1FO00160 1098 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 NDUFS2O75306 463 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 TSHRP16473 764 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 CAPN3P20807 821 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 CCND1P24385 295 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 PPM1AP35813 382 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 NKX6-1P78426 367 aaPredicted RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 LONRF1Q17RB8 773 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 CLEC16AQ2KHT3 1053 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 HDGFL2Q7Z4V5 671 aaPredicted RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 PNMA8AQ86V59 439 aaPredicted RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 B3GNT5Q9BYG0 378 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 SEMA6CQ9H3T2 930 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 PRDM12Q9H4Q4 367 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 DCP1AQ9NPI6 582 aaPredicted RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 STARD7Q9NQZ5 370 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 ACSS2Q9NR19 701 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 HSPBP1Q9NZL4 362 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 MYO15BQ96JP2 1530 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 F8W735 103 aaPredicted RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 J3KRW8 73 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 ELL2O00472 640 aaPredicted RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 PPP1R11O60927 126 aaPredicted RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 FGF18O76093 207 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 PPFIA1Q13136 1202 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 FAM47CQ5HY64 1035 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 JAKMIP3Q5VZ66 844 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 CDC37L1Q7L3B6 337 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 CDH24Q86UP0 819 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 CACNA2D3Q8IZS8 1091 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 GIMAP8Q8ND71 665 aaPredicted RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 PTCHD1Q96NR3 888 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 HAPLN2Q9GZV7 340 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 MS4A5Q9H3V2 200 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 FAM50BQ9Y247 325 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 NUMBLQ9Y6R0 609 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 TMEM82A0PJX8 343 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 H3BM21 787 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 H7C1D1 291 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 M0R3H8 397 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms