RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 DIS3Q9Y2L1 958 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 UTP11Q9Y3A2 253 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 NOC2LQ9Y3T9 749 aaKnown RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 FRMPD2Q68DX3 1309 aaPredicted RBP3.85□□□□□ -1.79
COL8A1-204ENST00000462604 CNTNAP4Q9C0A0 1308 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 PLIN4Q96Q06 1357 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 SNED1Q8TER0 1413 aa3.85□□□□□ -1.79
COL8A1-204ENST00000462604 BCORQ6W2J9 1755 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 CASZ1Q86V15 1759 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 DOCK2Q92608 1830 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 A0A087X0T9 212 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 GPR75-ASB3A0A0A6YYF3 556 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 GMNCA6NCL1 334 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 FAM187AA6NFU0 413 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 ZSCAN5CA6NGD5 496 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 TMCO5BA8MYB1 307 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 CHUKO15111 745 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 NKRFO15226 690 aaKnown RBP eCLIP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PPP1R12BO60237 982 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 TLR2O60603 784 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 ZPR1O75312 459 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 TBCAO75347 108 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 GFPT2O94808 682 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 TRIM37O94972 964 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PAEPP09466 180 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 H2AFZP0C0S5 128 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC172P0C7W6 258 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 FAM228BP0C875 321 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PDHBP11177 359 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 XRCC5P13010 732 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 FERP16591 822 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 NR2F2P24468 414 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 RPL13P26373 211 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 KLRC1P26715 233 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 GBP1P32455 592 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 MAP2K2P36507 400 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 HSD17B3P37058 310 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 NOVP48745 357 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 FNTAP49354 379 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 SMTNP53814 917 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 HSPA2P54652 639 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 NPEPPSP55786 919 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 ERVK-9P63128 1117 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PPP2R2AP63151 447 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 HDLBPQ00341 1268 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PTK2Q05397 1052 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 DDR1Q08345 913 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 ZNF844Q08AG5 666 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 KCNMA1Q12791 1236 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 KCNH2Q12809 1159 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 IFT88Q13099 833 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 ITGB3BPQ13352 177 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 ADAM9Q13443 819 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 GRAPQ13588 217 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 DIXDC1Q155Q3 683 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 ENOX2Q16206 610 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 UBE2SQ16763 222 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 EXOC3L4Q17RC7 722 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 KRT71Q3SY84 523 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 DCAF17Q5H9S7 520 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 SPDYCQ5MJ68 293 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 GPATCH4Q5T3I0 446 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 TBC1D9BQ66K14 1250 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 DPP8Q6V1X1 898 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 C15orf52Q6ZUT6 534 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 H2AFVQ71UI9 128 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PEX26Q7Z412 305 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 KCNK18Q7Z418 384 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 CROCCP2Q86T23 111 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC13Q8IYE1 715 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 SLFN12Q8IYM2 578 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 CACNA2D3Q8IZS8 1091 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 LRRC47Q8N1G4 583 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 LRRC57Q8N9N7 239 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 MARCH10Q8NA82 808 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 LINC00116Q8NCU8 138 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 GIMAP7Q8NHV1 300 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 GRAPLQ8TC17 118 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 UBLCP1Q8WVY7 318 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 COA7Q96BR5 231 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 DNAJC19Q96DA6 116 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 CEP95Q96GE4 821 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 POM121Q96HA1 1249 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC114Q96M63 670 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PACSIN1Q9BY11 444 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 UBA5Q9GZZ9 404 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 NSRP1Q9H0G5 558 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 RAB17Q9H0T7 212 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 STMN4Q9H169 189 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 DHX36Q9H2U1 1008 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 CPVLQ9H3G5 476 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 METTL14Q9HCE5 456 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 GPCPD1Q9NPB8 672 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 PPANQ9NQ55 473 aaKnown RBP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 EMILIN3Q9NT22 766 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 MTMR4Q9NYA4 1195 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 TBC1D7Q9P0N9 293 aa3.84□□□□□ -1.79
COL8A1-204ENST00000462604 BCCIPQ9P287 314 aaKnown RBP eCLIP3.84□□□□□ -1.79
COL8A1-204ENST00000462604 SUCLA2Q9P2R7 463 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms