RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 KMT2EQ8IZD2 1858 aa9.13□□□□□ -0.95
CDC42BPA-210ENST00000462553 PNMA6FA0A0J9YX94 578 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 GRXCR2A6NFK2 248 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 SPATA31C2B4DYI2 1134 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 H3BQ06 376 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 EPB41L2O43491 1005 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 REC8O95072 547 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 PLEKHA8P1O95397 391 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 RXRAP19793 462 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 MGAT3Q09327 533 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 TIGD5Q53EQ6 642 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 TCEAL5Q5H9L2 206 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 FAM26DQ5JW98 314 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 PTCRAQ6ISU1 281 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 APOA5Q6Q788 366 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 CYFIP1Q7L576 1253 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 DHX32Q7L7V1 743 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 GJD3Q8N144 294 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 SEPT8Q92599 483 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 SAMD11Q96NU1 681 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 SPZ1Q9BXG8 430 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 USP26Q9BXU7 913 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 SETD4Q9NVD3 440 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 NID2Q14112 1375 aa9.12□□□□□ -0.95
CDC42BPA-210ENST00000462553 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 NOP56O00567 594 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 MEIS2O14770 477 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 FIBPO43427 364 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 STAM2O75886 525 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 UPP2O95045 317 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 CHRNA1P02708 482 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 GPM6BQ13491 265 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 NEDD9Q14511 834 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 KRT32Q14532 448 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 GNPTABQ3T906 1256 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 RUFY4Q6ZNE9 571 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 MICU3Q86XE3 530 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 TMEM192Q8IY95 271 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 SRBD1Q8N5C6 995 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 BANK1Q8NDB2 785 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 PABPC5Q96DU9 382 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 JAKMIP1Q96N16 626 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 YME1L1Q96TA2 773 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 AGXT2Q9BYV1 514 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 IFIH1Q9BYX4 1025 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 EHMT1Q9H9B1 1298 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 BRPF3Q9ULD4 1205 aa9.11□□□□□ -0.95
CDC42BPA-210ENST00000462553 ADGRA3Q8IWK6 1321 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 CCDC69A6NI79 296 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 C5orf67F2Z3F1 127 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 PIK3CDO00329 1044 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 KCNA2P16389 499 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 RPS6KB1P23443 525 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 LTBRP36941 435 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 ARHGAP4P98171 946 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 ZP2Q05996 745 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 FUT2Q10981 343 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 TRAF1Q13077 416 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 MMRN1Q13201 1228 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 PTPROQ16827 1216 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 UTP14CQ5TAP6 766 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 PCNX4Q63HM2 1172 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 USP17L6PQ6QN14 398 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 NFXL1Q6ZNB6 911 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 TMTC3Q6ZXV5 915 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 RPAINQ86UA6 219 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 TMTC2Q8N394 836 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 FBXL16Q8N461 479 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 CTCFLQ8NI51 663 aaPredicted RBP9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 LINC01599Q8WXQ3 324 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 PIBF1Q8WXW3 757 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 APBB2Q92870 758 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 SENP7Q9BQF6 1050 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 NSUN3Q9H649 340 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 FAM217BQ9NTX9 383 aaPredicted RBP9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 RTEL1Q9NZ71 1219 aa9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 ZNF215Q9UL58 517 aaPredicted RBP9.1□□□□□ -0.95
CDC42BPA-210ENST00000462553 POTEB3A0JP26 581 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 MBLAC1A4D2B0 266 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 PRR33A8MZF0 331 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 GRM6O15303 877 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 ATP9AO75110 1047 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 CALM1P0DP23 149 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 CALM2P0DP24 149 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 CALM3P0DP25 149 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 GHRP10912 638 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 SMARCA1P28370 1054 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 CDC27P30260 824 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 SSTR3P32745 418 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 CTNNB1P35222 781 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 TCF7P36402 384 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 SP4Q02446 784 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 DLX2Q07687 328 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 LPIN1Q14693 890 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 CTC1Q2NKJ3 1217 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 PUS10Q3MIT2 529 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 MARCH8Q5T0T0 291 aa9.09□□□□□ -0.95
CDC42BPA-210ENST00000462553 BLOC1S2Q6QNY1 142 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms