RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 PDE12Q6L8Q7 609 aaKnown RBP17.7■□□□□ 0.42
APP-211ENST00000462267 RUFY4Q6ZNE9 571 aa17.7■□□□□ 0.42
APP-211ENST00000462267 CYFIP1Q7L576 1253 aa17.7■□□□□ 0.42
APP-211ENST00000462267 LINC01599Q8WXQ3 324 aa17.7■□□□□ 0.42
APP-211ENST00000462267 ZKSCAN3Q9BRR0 538 aa17.7■□□□□ 0.42
APP-211ENST00000462267 KAT14Q9H8E8 782 aa17.7■□□□□ 0.42
APP-211ENST00000462267 SUPT16HQ9Y5B9 1047 aaKnown RBP17.7■□□□□ 0.42
APP-211ENST00000462267 PPFIA3O75145 1194 aa17.69■□□□□ 0.42
APP-211ENST00000462267 STAM2O75886 525 aa17.69■□□□□ 0.42
APP-211ENST00000462267 RPLP2P05387 115 aaKnown RBP17.69■□□□□ 0.42
APP-211ENST00000462267 UTP14CQ5TAP6 766 aaKnown RBP17.69■□□□□ 0.42
APP-211ENST00000462267 RTN4RL1Q86UN2 441 aaPredicted RBP17.69■□□□□ 0.42
APP-211ENST00000462267 IQCA1Q86XH1 822 aa17.69■□□□□ 0.42
APP-211ENST00000462267 ZFP91Q96JP5 570 aaPredicted RBP17.69■□□□□ 0.42
APP-211ENST00000462267 PCDHB12Q9Y5F1 795 aa17.69■□□□□ 0.42
APP-211ENST00000462267 SQORQ9Y6N5 450 aa17.69■□□□□ 0.42
APP-211ENST00000462267 SPATA31C2B4DYI2 1134 aa17.68■□□□□ 0.42
APP-211ENST00000462267 HOXB8P17481 243 aaPredicted RBP17.68■□□□□ 0.42
APP-211ENST00000462267 CLCN5P51795 746 aa17.68■□□□□ 0.42
APP-211ENST00000462267 KCNC3Q14003 757 aa17.68■□□□□ 0.42
APP-211ENST00000462267 ANKRD54Q6NXT1 300 aa17.68■□□□□ 0.42
APP-211ENST00000462267 TBC1D10CQ8IV04 446 aa17.68■□□□□ 0.42
APP-211ENST00000462267 INPP4AQ96PE3 977 aaPredicted RBP17.68■□□□□ 0.42
APP-211ENST00000462267 AGO3Q9H9G7 860 aaKnown RBP17.68■□□□□ 0.42
APP-211ENST00000462267 AAASQ9NRG9 546 aa17.68■□□□□ 0.42
APP-211ENST00000462267 PCDHA1Q9Y5I3 950 aa17.68■□□□□ 0.42
APP-211ENST00000462267 CDY2AQ9Y6F7 541 aa17.68■□□□□ 0.42
APP-211ENST00000462267 EP300Q09472 2414 aaPredicted RBP17.67■□□□□ 0.42
APP-211ENST00000462267 MYH6P13533 1939 aa17.67■□□□□ 0.42
APP-211ENST00000462267 TRIM6-TRIM34B2RNG4 842 aa17.67■□□□□ 0.42
APP-211ENST00000462267 GCOM1H8Y6P7 765 aaPredicted RBP17.67■□□□□ 0.42
APP-211ENST00000462267 BRD1O95696 1058 aa17.67■□□□□ 0.42
APP-211ENST00000462267 POLR2MP0CAP2 368 aa17.67■□□□□ 0.42
APP-211ENST00000462267 SCG2P13521 617 aa17.67■□□□□ 0.42
APP-211ENST00000462267 CD52P31358 61 aa17.67■□□□□ 0.42
APP-211ENST00000462267 TECP42680 631 aa17.67■□□□□ 0.42
APP-211ENST00000462267 PPFIA1Q13136 1202 aa17.67■□□□□ 0.42
APP-211ENST00000462267 MCMDC2Q4G0Z9 681 aa17.67■□□□□ 0.42
APP-211ENST00000462267 SYCE2Q6PIF2 218 aa17.67■□□□□ 0.42
APP-211ENST00000462267 RASGRP4Q8TDF6 673 aa17.67■□□□□ 0.42
APP-211ENST00000462267 OTUD7AQ8TE49 926 aaPredicted RBP17.67■□□□□ 0.42
APP-211ENST00000462267 DNAJB3Q8WWF6 145 aa17.67■□□□□ 0.42
APP-211ENST00000462267 EVI5LQ96CN4 794 aa17.67■□□□□ 0.42
APP-211ENST00000462267 TUBE1Q9UJT0 475 aa17.67■□□□□ 0.42
APP-211ENST00000462267 ZNF292O60281 2723 aa17.67■□□□□ 0.42
APP-211ENST00000462267 KIAA1671Q9BY89 1806 aa17.66■□□□□ 0.42
APP-211ENST00000462267 KAT6AQ92794 2004 aa17.66■□□□□ 0.42
APP-211ENST00000462267 MBLAC1A4D2B0 266 aaPredicted RBP17.66■□□□□ 0.42
APP-211ENST00000462267 ZBTB5O15062 677 aa17.66■□□□□ 0.42
APP-211ENST00000462267 FIBPO43427 364 aa17.66■□□□□ 0.42
APP-211ENST00000462267 MX1P20591 662 aa17.66■□□□□ 0.42
APP-211ENST00000462267 SP100P23497 879 aaPredicted RBP17.66■□□□□ 0.42
APP-211ENST00000462267 MRPS6P82932 125 aaKnown RBP17.66■□□□□ 0.42
APP-211ENST00000462267 TRAF1Q13077 416 aa17.66■□□□□ 0.42
APP-211ENST00000462267 FCHSD1Q86WN1 690 aa17.66■□□□□ 0.42
APP-211ENST00000462267 MTMR8Q96EF0 704 aa17.66■□□□□ 0.42
APP-211ENST00000462267 SENP7Q9BQF6 1050 aa17.66■□□□□ 0.42
APP-211ENST00000462267 MFSD1Q9H3U5 465 aa17.66■□□□□ 0.42
APP-211ENST00000462267 LRFN2Q9ULH4 789 aa17.66■□□□□ 0.42
APP-211ENST00000462267 WDR87Q6ZQQ6 2873 aa17.66■□□□□ 0.42
APP-211ENST00000462267 MED19A0JLT2 244 aaPredicted RBP17.65■□□□□ 0.42
APP-211ENST00000462267 FSCN2O14926 492 aa17.65■□□□□ 0.42
APP-211ENST00000462267 PPP1R11O60927 126 aaPredicted RBP17.65■□□□□ 0.42
APP-211ENST00000462267 FGF18O76093 207 aa17.65■□□□□ 0.42
APP-211ENST00000462267 ERVFC1P60507 584 aa17.65■□□□□ 0.42
APP-211ENST00000462267 MRPS9P82933 396 aaKnown RBP17.65■□□□□ 0.42
APP-211ENST00000462267 SEMA3FQ13275 785 aa17.65■□□□□ 0.42
APP-211ENST00000462267 GRIK4Q16099 956 aa17.65■□□□□ 0.42
APP-211ENST00000462267 IER5Q5VY09 327 aa17.65■□□□□ 0.42
APP-211ENST00000462267 FAM43BQ6ZT52 329 aaPredicted RBP17.65■□□□□ 0.42
APP-211ENST00000462267 TICAM2Q86XR7 235 aa17.65■□□□□ 0.42
APP-211ENST00000462267 TSHZ2Q9NRE2 1034 aa17.65■□□□□ 0.42
APP-211ENST00000462267 NEDD4P46934 1319 aa17.65■□□□□ 0.42
APP-211ENST00000462267 EPG5Q9HCE0 2579 aa17.65■□□□□ 0.42
APP-211ENST00000462267 GATMP50440 423 aa17.64■□□□□ 0.41
APP-211ENST00000462267 SPOUT1Q5T280 376 aaKnown RBP17.64■□□□□ 0.41
APP-211ENST00000462267 DGLUCYQ7Z3D6 616 aa17.64■□□□□ 0.41
APP-211ENST00000462267 ENAHQ8N8S7 591 aaPredicted RBP17.64■□□□□ 0.41
APP-211ENST00000462267 GIMAP8Q8ND71 665 aaPredicted RBP17.64■□□□□ 0.41
APP-211ENST00000462267 FAM227BQ96M60 508 aa17.64■□□□□ 0.41
APP-211ENST00000462267 NECTIN4Q96NY8 510 aa17.64■□□□□ 0.41
APP-211ENST00000462267 ZSCAN10Q96SZ4 725 aaPredicted RBP17.64■□□□□ 0.41
APP-211ENST00000462267 TMEM260Q9NX78 707 aa17.64■□□□□ 0.41
APP-211ENST00000462267 PADI3Q9ULW8 664 aa17.64■□□□□ 0.41
APP-211ENST00000462267 LZTS1Q9Y250 596 aa17.64■□□□□ 0.41
APP-211ENST00000462267 TELO2Q9Y4R8 837 aa17.64■□□□□ 0.41
APP-211ENST00000462267 PLXNA4Q9HCM2 1894 aa17.64■□□□□ 0.41
APP-211ENST00000462267 FRMPD4Q14CM0 1322 aa17.64■□□□□ 0.41
APP-211ENST00000462267 A0A0D9SFI3 127 aa17.63■□□□□ 0.41
APP-211ENST00000462267 TCF7P36402 384 aaPredicted RBP17.63■□□□□ 0.41
APP-211ENST00000462267 SP4Q02446 784 aa17.63■□□□□ 0.41
APP-211ENST00000462267 PAK2Q13177 524 aa17.63■□□□□ 0.41
APP-211ENST00000462267 TPRNQ4KMQ1 711 aa17.63■□□□□ 0.41
APP-211ENST00000462267 MARCH8Q5T0T0 291 aa17.63■□□□□ 0.41
APP-211ENST00000462267 THNSL1Q8IYQ7 743 aa17.63■□□□□ 0.41
APP-211ENST00000462267 RMDN1Q96DB5 314 aa17.63■□□□□ 0.41
APP-211ENST00000462267 APOL5Q9BWW9 433 aa17.63■□□□□ 0.41
APP-211ENST00000462267 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
APP-211ENST00000462267 ERAP1Q9NZ08 941 aa17.63■□□□□ 0.41
APP-211ENST00000462267 PCDHB7Q9Y5E2 793 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms