RNA–Protein interactions for RNA: ENST00000462257.1

SH3D19-205, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-205ENST00000462257 ECHDC1Q9NTX5 307 aa8.31□□□□□ -1.08
SH3D19-205ENST00000462257 PTPDC1A2A3K4 754 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 LCHNA4D1U4 455 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 RNF113AO15541 343 aaKnown RBP8.3□□□□□ -1.08
SH3D19-205ENST00000462257 IGHDP01880 384 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 CASTP20810 708 aaKnown RBP8.3□□□□□ -1.08
SH3D19-205ENST00000462257 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.3□□□□□ -1.089e-7■■□□□ 14.4
SH3D19-205ENST00000462257 TIGD5Q53EQ6 642 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 TMEM63BQ5T3F8 832 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 BTNL9Q6UXG8 535 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 IFNL3Q8IZI9 196 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 DCAF4Q8WV16 495 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 PABPC5Q96DU9 382 aaKnown RBP8.3□□□□□ -1.08
SH3D19-205ENST00000462257 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
SH3D19-205ENST00000462257 KATNAL1Q9BW62 490 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 BCL11AQ9H165 835 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 RANBP17Q9H2T7 1088 aaKnown RBP8.3□□□□□ -1.08
SH3D19-205ENST00000462257 STX8Q9UNK0 236 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 MUC6Q6W4X9 2439 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 PIEZO1Q92508 2521 aa8.3□□□□□ -1.08
SH3D19-205ENST00000462257 EMSYQ7Z589 1322 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 LCTP09848 1927 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 TSPY2A6NKD2 308 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 ESPNB1AK53 854 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 GPAA1O43292 621 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 AMHP03971 560 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 CKBP12277 381 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 IL9P15248 144 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 PTGS1P23219 599 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 EDNRBP24530 442 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 NUCB1Q02818 461 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 PTK7Q13308 1070 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 ERICH6BQ5W0A0 696 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 RNF207Q6ZRF8 634 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 KCTD1Q719H9 257 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 ADHFE1Q8IWW8 467 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 C7orf31Q8N865 590 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 BANK1Q8NDB2 785 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 RGS22Q8NE09 1264 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 OSBP2Q969R2 916 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 NAPBQ9H115 298 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 IRF2BPLQ9H1B7 796 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 MTUS1Q9ULD2 1270 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 TET1Q8NFU7 2136 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 TTC41PQ6P2S7 1318 aa8.29□□□□□ -1.08
SH3D19-205ENST00000462257 H3BNC9 293 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 LGR5O75473 907 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 GH1P01241 217 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 CHGBP05060 677 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 CALML3P27482 149 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 CHMP4BP1P59074 171 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 DEFB103AP81534 67 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 HTRA4P83105 476 aaPredicted RBP8.28□□□□□ -1.08
SH3D19-205ENST00000462257 ZP2Q05996 745 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 GPNMBQ14956 572 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 COL19A1Q14993 1142 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 DGKDQ16760 1214 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 SYDE2Q5VT97 1194 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 GDF6Q6KF10 455 aaPredicted RBP8.28□□□□□ -1.08
SH3D19-205ENST00000462257 B4GALNT3Q6L9W6 998 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 BMP8AQ7Z5Y6 402 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 CHD1LQ86WJ1 897 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 NSUN3Q9H649 340 aaKnown RBP8.28□□□□□ -1.08
SH3D19-205ENST00000462257 EPB41L4AQ9HCS5 686 aaPredicted RBP8.28□□□□□ -1.08
SH3D19-205ENST00000462257 TMPRSS4Q9NRS4 437 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 GTF2IRD1Q9UHL9 959 aa8.28□□□□□ -1.08
SH3D19-205ENST00000462257 FIGNL2A6NMB9 653 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 NFIBO00712 420 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 NBNO60934 754 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 LILRA1O75019 489 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 MX1P20591 662 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 NOVP48745 357 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 SNAP25P60880 206 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 RPS6P62753 249 aaKnown RBP8.27□□□□□ -1.09
SH3D19-205ENST00000462257 PTSQ03393 145 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 PPARAQ07869 468 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 CCDC96Q2M329 555 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 EPC2Q52LR7 807 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 HERC4Q5GLZ8 1057 aaPredicted RBP8.27□□□□□ -1.09
SH3D19-205ENST00000462257 CCDC62Q6P9F0 684 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 SPRED2Q7Z698 418 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 AFG1LQ8WV93 481 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 IWS1Q96ST2 819 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 LNPKQ9C0E8 428 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 DDX49Q9Y6V7 483 aaKnown RBP8.27□□□□□ -1.09
SH3D19-205ENST00000462257 WDR19Q8NEZ3 1342 aa8.27□□□□□ -1.09
SH3D19-205ENST00000462257 RALGAPA2Q2PPJ7 1873 aa8.26□□□□□ -1.09
SH3D19-205ENST00000462257 H3BQ06 376 aaPredicted RBP8.26□□□□□ -1.09
SH3D19-205ENST00000462257 ERVH48-1M5A8F1 160 aa8.26□□□□□ -1.09
SH3D19-205ENST00000462257 RB1P06400 928 aa8.26□□□□□ -1.09
SH3D19-205ENST00000462257 MMP3P08254 477 aa8.26□□□□□ -1.09
SH3D19-205ENST00000462257 TOP1P11387 765 aaKnown RBP8.26□□□□□ -1.09
SH3D19-205ENST00000462257 ADD1P35611 737 aaKnown RBP8.26□□□□□ -1.09
SH3D19-205ENST00000462257 CTSOP43234 321 aaPredicted RBP8.26□□□□□ -1.09
SH3D19-205ENST00000462257 PDE1AP54750 535 aa8.26□□□□□ -1.09
SH3D19-205ENST00000462257 GPM6BQ13491 265 aa8.26□□□□□ -1.09
SH3D19-205ENST00000462257 LAMC2Q13753 1193 aa8.26□□□□□ -1.09
SH3D19-205ENST00000462257 SMAD2Q15796 467 aaKnown RBP8.26□□□□□ -1.09
SH3D19-205ENST00000462257 STXBP2Q15833 593 aa8.26□□□□□ -1.09
SH3D19-205ENST00000462257 EP400NLQ6ZTU2 488 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms