RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 WWC2Q6AWC2 1192 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 PPP4R4Q6NUP7 873 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 UBE3BQ7Z3V4 1068 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 NLRP10Q86W26 655 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 SYNE4Q8N205 404 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 ANKRD44Q8N8A2 993 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 C19orf47Q8N9M1 422 aaKnown RBP5.63□□□□□ -1.51
CSMD3-205ENST00000462254 KCT2Q8NC54 265 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 CCDC191Q8NCU4 936 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 RIN3Q8TB24 985 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 FOXQ1Q9C009 403 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 CHMP4BQ9H444 224 aaKnown RBP5.63□□□□□ -1.51
CSMD3-205ENST00000462254 LRRC4CQ9HCJ2 640 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 BRMS1Q9HCU9 246 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 PRDM10Q9NQV6 1147 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 CWC25Q9NXE8 425 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-205ENST00000462254 C9orf78Q9NZ63 289 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-205ENST00000462254 PIM2Q9P1W9 311 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 SFMBT1Q9UHJ3 866 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 MAPRE3Q9UPY8 281 aa5.63□□□□□ -1.51
CSMD3-205ENST00000462254 PNMA6EA0A0J9YXQ4 647 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 DNAJA2O60884 412 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 DDAH1O94760 285 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 SLITRK5O94991 958 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 HTR3BO95264 441 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 NTSR2O95665 410 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 GNAI2P04899 355 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 PCCAP05165 728 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-205ENST00000462254 GYS1P13807 737 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 PLCG1P19174 1290 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 RFC4P35249 363 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 GUCY2FP51841 1108 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 SLC15A2Q16348 729 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 C21orf62-AS1Q17RA5 79 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 SUSD4Q5VX71 490 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 FBXW10Q5XX13 1052 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 FAM214BQ7L5A3 538 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 LSRQ86X29 649 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-205ENST00000462254 COL23A1Q86Y22 540 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-205ENST00000462254 MCATQ8IVS2 390 aaKnown RBP5.62□□□□□ -1.51
CSMD3-205ENST00000462254 CHPFQ8IZ52 775 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 TMTC2Q8N394 836 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 AFAP1L2Q8N4X5 818 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 FAM181AQ8N9Y4 354 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 GIMAP7Q8NHV1 300 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 TMEM87BQ96K49 555 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 BICC1Q9H694 974 aaKnown RBP5.62□□□□□ -1.51
CSMD3-205ENST00000462254 CHST12Q9NRB3 414 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 REV1Q9UBZ9 1251 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 NIP7Q9Y221 180 aaKnown RBP eCLIP5.62□□□□□ -1.51
CSMD3-205ENST00000462254 ZNF652Q9Y2D9 606 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 CDHR2Q9BYE9 1310 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 ABCC12Q96J65 1359 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 CCDC88AQ3V6T2 1871 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 AKAP11Q9UKA4 1901 aa5.62□□□□□ -1.51
CSMD3-205ENST00000462254 E2F8A0AVK6 867 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 IRS4O14654 1257 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 CYP26A1O43174 497 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 LRIG2O94898 1065 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 CST3P01034 146 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 FOSL1P15407 271 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 CPEP16870 476 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 MCM4P33991 863 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 CAP2P40123 477 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 CD97P48960 835 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 RAB27AP51159 221 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 NEK2P51955 445 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 FOXO4P98177 505 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 ATP8B2P98198 1209 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 CYP27A1Q02318 531 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 CLCQ05315 142 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 POU5F1BQ06416 359 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 PDE4BQ07343 736 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 FOXD4Q12950 439 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 PABPC4Q13310 644 aaKnown RBP eCLIP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 MTX1Q13505 466 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 LTBP1Q14766 1721 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 RABL6Q3YEC7 729 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 PARP10Q53GL7 1025 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 C14orf80Q86SX3 495 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 MRPL41Q8IXM3 137 aaKnown RBP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 RPAP2Q8IXW5 612 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 SLX4Q8IY92 1834 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 ZBTB38Q8NAP3 1195 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 ATL2Q8NHH9 583 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 TTC8Q8TAM2 541 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 SSH3Q8TE77 659 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 PPM1EQ8WY54 764 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 FAM89AQ96GI7 184 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 ZNF512BQ96KM6 892 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 HEXIM2Q96MH2 286 aaKnown RBP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 NAP1L4Q99733 375 aaKnown RBP5.61□□□□□ -1.51
CSMD3-205ENST00000462254 ARPC5LQ9BPX5 153 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 ASPSCR1Q9BZE9 553 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 TFCP2L1Q9NZI6 479 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 ZIM2Q9NZV7 527 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 ADAM30Q9UKF2 790 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 PCDHB14Q9Y5E9 798 aa5.61□□□□□ -1.51
CSMD3-205ENST00000462254 RIC1Q4ADV7 1423 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms