RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 DOCK5Q9H7D0 1870 aa13.14□□□□□ -0.31
TRAF3IP1-204ENST00000462122 BMP15O95972 392 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 CD4P01730 458 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 GNAT1P11488 350 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 FAAP100Q0VG06 881 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 RESTQ13127 1097 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 NBR1Q14596 966 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 SWSAP1Q6NVH7 229 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PDXDC2PQ6P474 469 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 FERMT3Q86UX7 667 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ATP6V0A1Q93050 837 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TMEM60Q9H2L4 133 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TTC12Q9H892 705 aaPredicted RBP13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PDLIM7Q9NR12 457 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 HDAC6Q9UBN7 1215 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 MAFBQ9Y5Q3 323 aaPredicted RBP13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 IGSF9BQ9UPX0 1349 aa13.13□□□□□ -0.31
TRAF3IP1-204ENST00000462122 C17orf102A2RUQ5 167 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 B4GALT4O60513 344 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 SMIM10L2AP0DMW4 78 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 SMIM10L2BP0DMW5 78 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 MARK3P27448 753 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 HOXC8P31273 242 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TXKP42681 527 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 SPIRE1Q08AE8 756 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TMEM266Q2M3C6 531 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 FAM167AQ96KS9 214 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 RNPEPQ9H4A4 650 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TRMT13Q9NUP7 481 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TMEM39AQ9NV64 488 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 GABBR1Q9UBS5 961 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TRPC6Q9Y210 931 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 NOD1Q9Y239 953 aa13.12□□□□□ -0.31
TRAF3IP1-204ENST00000462122 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 KIAA0355O15063 1070 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 DKC1O60832 514 aaKnown RBP eCLIP13.11□□□□□ -0.315e-10■■■■■ 45.1
TRAF3IP1-204ENST00000462122 ZSCAN22P10073 491 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ANP32AP39687 249 aaKnown RBP13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PRPHP41219 470 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PPFIA1Q13136 1202 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PTGDRQ13258 359 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PLCB4Q15147 1175 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 EPHA7Q15375 998 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PTGISQ16647 500 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 NCAPH2Q6IBW4 605 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 GDF6Q6KF10 455 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 CKAP2LQ8IYA6 745 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 C4orf32Q8N8J7 132 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 NEK9Q8TD19 979 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ATP8B4Q8TF62 1192 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 BBXQ8WY36 941 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 RAB34Q9BZG1 259 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TRPV6Q9H1D0 765 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PRDM5Q9NQX1 630 aaPredicted RBP13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TBX21Q9UL17 535 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 CEP131Q9UPN4 1083 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ALPK3Q96L96 1907 aa13.11□□□□□ -0.31
TRAF3IP1-204ENST00000462122 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
TRAF3IP1-204ENST00000462122 EML1O00423 815 aa13.1□□□□□ -0.31
TRAF3IP1-204ENST00000462122 HBP1O60381 514 aa13.1□□□□□ -0.31
TRAF3IP1-204ENST00000462122 P4HBP07237 508 aaKnown RBP13.1□□□□□ -0.31
TRAF3IP1-204ENST00000462122 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PSMC5P62195 406 aa13.1□□□□□ -0.31
TRAF3IP1-204ENST00000462122 CCDC155Q8N6L0 562 aa13.1□□□□□ -0.31
TRAF3IP1-204ENST00000462122 SETD4Q9NVD3 440 aa13.1□□□□□ -0.31
TRAF3IP1-204ENST00000462122 STK24Q9Y6E0 443 aa13.1□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PDE4DIPQ5VU43 2346 aa13.1□□□□□ -0.31
TRAF3IP1-204ENST00000462122 COL1A2P08123 1366 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TRIM43BA6NCK2 446 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 F13A1P00488 732 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 OATP04181 439 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 INSRRP14616 1297 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 RAG1P15918 1043 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ATP4AP20648 1035 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TECP42680 631 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 QARSP47897 775 aaKnown RBP13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ADAM17P78536 824 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PRKCEQ02156 737 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PTK7Q13308 1070 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 GRIK4Q16099 956 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 UGCGQ16739 394 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 XKR3Q5GH77 459 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ZNF484Q5JVG2 852 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ARL6IP4Q66PJ3 421 aaKnown RBP13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 DTHD1Q6ZMT9 781 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ERMNQ8TAM6 284 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 CAGE1Q8TC20 777 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 PPP1R13LQ8WUF5 828 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 LMBR1Q8WVP7 490 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 TRIM43Q96BQ3 446 aaPredicted RBP13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 LXNQ9BS40 222 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 HIPK3Q9H422 1215 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 NRBP2Q9NSY0 501 aa13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 ZMYND8Q9ULU4 1186 aaPredicted RBP13.09□□□□□ -0.31
TRAF3IP1-204ENST00000462122 POTEMA6NI47 508 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms