RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 METTL13Q8N6R0 699 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 ACTRT1Q8TDG2 376 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.19■□□□□ 0.825e-8■■■■■ 65.3
HPS3-204ENST00000462030 NYXQ9GZU5 481 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 BCCIPQ9P287 314 aaKnown RBP eCLIP20.19■□□□□ 0.82
HPS3-204ENST00000462030 FBXL5Q9UKA1 691 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 KIAA1024Q9UPX6 916 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 NHSQ6T4R5 1651 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 hCG_1984214I3L0E3 225 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 DPY19L2P1Q6NXN4 242 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 CCDC65Q8IXS2 484 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 ZNF713Q8N859 430 aaPredicted RBP20.19■□□□□ 0.82
HPS3-204ENST00000462030 PBKQ96KB5 322 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 SETDB2Q96T68 719 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 GPCPD1Q9NPB8 672 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 BMP2KQ9NSY1 1161 aaPredicted RBP20.19■□□□□ 0.82
HPS3-204ENST00000462030 EMILIN3Q9NT22 766 aa20.19■□□□□ 0.82
HPS3-204ENST00000462030 POTEB3A0JP26 581 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 SRRM3A6NNA2 597 aaPredicted RBP20.18■□□□□ 0.82
HPS3-204ENST00000462030 POTECB2RU33 542 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 BHMG1C9JSJ3 638 aaPredicted RBP20.18■□□□□ 0.82
HPS3-204ENST00000462030 BACH1O14867 736 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 MARCH6O60337 910 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 ITGA4P13612 1032 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 EIF6P56537 245 aaKnown RBP20.18■□□□□ 0.82
HPS3-204ENST00000462030 QPCTQ16769 361 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 POTEBQ6S5H4 581 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 GPBP1Q86WP2 473 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 EIF1ADQ8N9N8 165 aaKnown RBP20.18■□□□□ 0.82
HPS3-204ENST00000462030 UBLCP1Q8WVY7 318 aaPredicted RBP20.18■□□□□ 0.82
HPS3-204ENST00000462030 LRRC45Q96CN5 670 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 CNOT8Q9UFF9 292 aaKnown RBP20.18■□□□□ 0.82
HPS3-204ENST00000462030 ARFGEF1Q9Y6D6 1849 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 KIF13BQ9NQT8 1826 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 PGRMC1O00264 195 aaKnown RBP20.18■□□□□ 0.82
HPS3-204ENST00000462030 PPP1R11O60927 126 aaPredicted RBP20.18■□□□□ 0.82
HPS3-204ENST00000462030 LDHCP07864 332 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 PLA2G4BP0C869 781 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 GSCP56915 257 aaPredicted RBP20.18■□□□□ 0.82
HPS3-204ENST00000462030 SPRED3Q2MJR0 410 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 CD248Q9HCU0 757 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 NAGPAQ9UK23 515 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 HDAC9Q9UKV0 1011 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 PCDHA12Q9UN75 941 aa20.18■□□□□ 0.82
HPS3-204ENST00000462030 TMCO5BA8MYB1 307 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 NR2F2P24468 414 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 NOVP48745 357 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 ZC3H3Q8IXZ2 948 aaKnown RBP20.17■□□□□ 0.82
HPS3-204ENST00000462030 RBM46Q8TBY0 533 aaKnown RBP20.17■□□□□ 0.82
HPS3-204ENST00000462030 SPAG5Q96R06 1193 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 ZHX3Q9H4I2 956 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 LRRC4CQ9HCJ2 640 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 DDX20Q9UHI6 824 aaKnown RBP20.17■□□□□ 0.82
HPS3-204ENST00000462030 AMACRQ9UHK6 382 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 GGA2Q9UJY4 613 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 SPATA31A1Q5TZJ5 1347 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 GMNCA6NCL1 334 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 DCDC2CA8MYV0 355 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 DAPK3O43293 454 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 UCHL3P15374 230 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 CYP11B2P19099 503 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 CASP5P51878 434 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 DDR1Q08345 913 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 NFIXQ14938 502 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 ALKBH5Q6P6C2 394 aaKnown RBP20.17■□□□□ 0.82
HPS3-204ENST00000462030 TPCN2Q8NHX9 752 aa20.17■□□□□ 0.82
HPS3-204ENST00000462030 JPH2Q9BR39 696 aaPredicted RBP20.17■□□□□ 0.82
HPS3-204ENST00000462030 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.17■□□□□ 0.82
HPS3-204ENST00000462030 TRAPPC3O43617 180 aa20.16■□□□□ 0.82
HPS3-204ENST00000462030 SETQ01105 290 aaPredicted RBP20.16■□□□□ 0.82
HPS3-204ENST00000462030 HYIQ5T013 277 aa20.16■□□□□ 0.82
HPS3-204ENST00000462030 CALR3Q96L12 384 aaKnown RBP20.16■□□□□ 0.82
HPS3-204ENST00000462030 CDCA7Q9BWT1 371 aaPredicted RBP20.16■□□□□ 0.82
HPS3-204ENST00000462030 AJAP1Q9UKB5 411 aaPredicted RBP20.16■□□□□ 0.82
HPS3-204ENST00000462030 KRIT1O00522 736 aa20.16■□□□□ 0.82
HPS3-204ENST00000462030 CETN3O15182 167 aa20.16■□□□□ 0.82
HPS3-204ENST00000462030 CLK2P49760 499 aaKnown RBP20.16■□□□□ 0.82
HPS3-204ENST00000462030 C10orf76Q5T2E6 689 aa20.16■□□□□ 0.82
HPS3-204ENST00000462030 NT5C3AQ9H0P0 336 aa20.16■□□□□ 0.82
HPS3-204ENST00000462030 DNAJC5Q9H3Z4 198 aa20.16■□□□□ 0.82
HPS3-204ENST00000462030 NOVA2Q9UNW9 492 aaKnown RBP20.16■□□□□ 0.82
HPS3-204ENST00000462030 KDM3AQ9Y4C1 1321 aa20.16■□□□□ 0.82
HPS3-204ENST00000462030 TNRC6CQ9HCJ0 1690 aaKnown RBP20.16■□□□□ 0.82
HPS3-204ENST00000462030 RASSF9O75901 435 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 SMTNP53814 917 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 ODF2Q5BJF6 829 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 CELF4Q9BZC1 486 aaKnown RBP20.15■□□□□ 0.82
HPS3-204ENST00000462030 JMJD4Q9H9V9 463 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 KLC4Q9NSK0 619 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 COL24A1Q17RW2 1714 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 STRCQ7RTU9 1775 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 GPR75-ASB3A0A0A6YYF3 556 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 TTI1O43156 1089 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 PPP2R2AP63151 447 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 BIRC3Q13489 604 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 ASPRV1Q53RT3 343 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 RUFY4Q6ZNE9 571 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 CCDC121Q6ZUS5 278 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 PEX26Q7Z412 305 aa20.15■□□□□ 0.82
HPS3-204ENST00000462030 OSBPL7Q9BZF2 842 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms