RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 KIF28PB7ZC32 967 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 MEIS1O00470 390 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 PARNO95453 639 aaKnown RBP17.68■□□□□ 0.42
NUP50-213ENST00000461437 CCNE2O96020 404 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 CHRNA1P02708 482 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 GNAT1P11488 350 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 PLEKHG4Q58EX7 1191 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 MARCH8Q5T0T0 291 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 PLA2G4DQ86XP0 818 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 MYOCDQ8IZQ8 938 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 DNAJB3Q8WWF6 145 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 SDF4Q9BRK5 362 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 ZMYND12Q9H0C1 365 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 ERAP1Q9NZ08 941 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 NRCAMQ92823 1304 aa17.68■□□□□ 0.42
NUP50-213ENST00000461437 IGLV3-22A0A075B6J6 115 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 MAFGO15525 162 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 GJB5O95377 273 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 GHRP10912 638 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 INSRRP14616 1297 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 AKAP17AQ02040 695 aaKnown RBP17.67■□□□□ 0.42
NUP50-213ENST00000461437 TMEM62Q0P6H9 643 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 MKRN4PQ13434 485 aaPredicted RBP17.67■□□□□ 0.42
NUP50-213ENST00000461437 PLCB4Q15147 1175 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
NUP50-213ENST00000461437 FBXL16Q8N461 479 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 CRYGNQ8WXF5 182 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 AIFM3Q96NN9 605 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 FAM49AQ9H0Q0 323 aaPredicted RBP17.67■□□□□ 0.42
NUP50-213ENST00000461437 SMARCAD1Q9H4L7 1026 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 C6orf50Q9HD87 102 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 TUBE1Q9UJT0 475 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 TRPC6Q9Y210 931 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 CYP46A1Q9Y6A2 500 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 NFASCO94856 1347 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 EMSYQ7Z589 1322 aa17.67■□□□□ 0.42
NUP50-213ENST00000461437 ESYT2A0FGR8 921 aa17.66■□□□□ 0.42
NUP50-213ENST00000461437 IFNAR1P17181 557 aa17.66■□□□□ 0.42
NUP50-213ENST00000461437 EVCP57679 992 aa17.66■□□□□ 0.42
NUP50-213ENST00000461437 GDPD5Q8WTR4 605 aa17.66■□□□□ 0.42
NUP50-213ENST00000461437 RNF26Q9BY78 433 aaPredicted RBP17.66■□□□□ 0.42
NUP50-213ENST00000461437 ATG2AQ2TAZ0 1938 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.65■□□□□ 0.42
NUP50-213ENST00000461437 EDIL3O43854 480 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 UPP2O95045 317 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 STAT5BP51692 787 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 MGAT3Q09327 533 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 GRB10Q13322 594 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 TRMT1LQ7Z2T5 733 aaKnown RBP17.65■□□□□ 0.42
NUP50-213ENST00000461437 CCDC60Q8IWA6 550 aaPredicted RBP17.65■□□□□ 0.42
NUP50-213ENST00000461437 SEPT8Q92599 483 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 GJA10Q969M2 543 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 GLT8D2Q9H1C3 349 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 AZI2Q9H6S1 392 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 PDRG1Q9NUG6 133 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 CDY2AQ9Y6F7 541 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 TRANK1O15050 2925 aa17.65■□□□□ 0.42
NUP50-213ENST00000461437 LINC01553A4QN01 128 aa17.64■□□□□ 0.41
NUP50-213ENST00000461437 DHX15O43143 795 aaKnown RBP17.64■□□□□ 0.41
NUP50-213ENST00000461437 AMHP03971 560 aa17.64■□□□□ 0.41
NUP50-213ENST00000461437 PRR16Q569H4 304 aa17.64■□□□□ 0.41
NUP50-213ENST00000461437 FAM26DQ5JW98 314 aa17.64■□□□□ 0.41
NUP50-213ENST00000461437 MTCH2Q9Y6C9 303 aa17.64■□□□□ 0.41
NUP50-213ENST00000461437 KIAA1671Q9BY89 1806 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 MBLAC1A4D2B0 266 aaPredicted RBP17.63■□□□□ 0.41
NUP50-213ENST00000461437 BACH1O14867 736 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 LPXNO60711 386 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 CAND2O75155 1236 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 ATG7O95352 703 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 CYP3A4P08684 503 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 NLRP5P59047 1200 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 LPIN1Q14693 890 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 ABHD15Q6UXT9 468 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 CCDC12Q8WUD4 166 aaPredicted RBP17.63■□□□□ 0.41
NUP50-213ENST00000461437 RAD9AQ99638 391 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 ZNF577Q9BSK1 485 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 IFIH1Q9BYX4 1025 aaKnown RBP17.63■□□□□ 0.41
NUP50-213ENST00000461437 BRWD1Q9NSI6 2320 aa17.63■□□□□ 0.41
NUP50-213ENST00000461437 TTC3P53804 2025 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 MYO7AQ13402 2215 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 IPO5O00410 1097 aaKnown RBP17.62■□□□□ 0.41
NUP50-213ENST00000461437 EFCAB14O75071 495 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 ATP4AP20648 1035 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 GNA11P29992 359 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 SSRP1Q08945 709 aaKnown RBP17.62■□□□□ 0.41
NUP50-213ENST00000461437 SWSAP1Q6NVH7 229 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 TAF2Q6P1X5 1199 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 NIPA1Q7RTP0 329 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 CCDC148Q8NFR7 591 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 LENG9Q96B70 501 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 C17orf80Q9BSJ5 609 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 TM6SF1Q9BZW5 370 aa17.62■□□□□ 0.41
NUP50-213ENST00000461437 AGO3Q9H9G7 860 aaKnown RBP17.62■□□□□ 0.41
NUP50-213ENST00000461437 RALGAPA2Q2PPJ7 1873 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 IGKV6D-21A0A0A0MT36 114 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 POTEB3A0JP26 581 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 CPLX1O14810 134 aa17.61■□□□□ 0.41
NUP50-213ENST00000461437 EPB41L2O43491 1005 aaKnown RBP17.61■□□□□ 0.41
NUP50-213ENST00000461437 MRPS6P82932 125 aaKnown RBP17.61■□□□□ 0.41
NUP50-213ENST00000461437 TFF2Q03403 129 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms