RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 FBF1Q8TES7 1133 aa15.73■□□□□ 0.11
NCL-207ENST00000461347 DUSP9Q99956 384 aaKnown RBP15.73■□□□□ 0.11
NCL-207ENST00000461347 REXO2Q9Y3B8 237 aaKnown RBP15.73■□□□□ 0.11
NCL-207ENST00000461347 GMNCA6NCL1 334 aa15.73■□□□□ 0.11
NCL-207ENST00000461347 CCDC188H7C350 402 aa15.73■□□□□ 0.11
NCL-207ENST00000461347 RAD51CO43502 376 aa15.73■□□□□ 0.11
NCL-207ENST00000461347 ZKSCAN8Q15776 578 aaPredicted RBP15.73■□□□□ 0.11
NCL-207ENST00000461347 WDR59Q6PJI9 974 aa15.73■□□□□ 0.11
NCL-207ENST00000461347 CEP63Q96MT8 703 aa15.73■□□□□ 0.11
NCL-207ENST00000461347 A0A1W2PQJ5 194 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 GAS7O60861 476 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 BRD2P25440 801 aaKnown RBP15.72■□□□□ 0.11
NCL-207ENST00000461347 TRAF1Q13077 416 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 ZNF211Q13398 564 aaPredicted RBP15.72■□□□□ 0.11
NCL-207ENST00000461347 SBK1Q52WX2 424 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 CROCCP2Q86T23 111 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 SEMA6BQ9H3T3 888 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 KIF1AQ12756 1690 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 NPHP3-ACAD11A0A0J9YXS1 232 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 LMNB1P20700 586 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 STAT3P40763 770 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 MDH1P40925 334 aaKnown RBP15.72■□□□□ 0.11
NCL-207ENST00000461347 TBC1D10BQ4KMP7 808 aaPredicted RBP15.72■□□□□ 0.11
NCL-207ENST00000461347 FAM133BQ5BKY9 247 aaKnown RBP15.72■□□□□ 0.11
NCL-207ENST00000461347 ODR4Q5SWX8 454 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 PACS2Q86VP3 889 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 PPM1KQ8N3J5 372 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 NEK9Q8TD19 979 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 ZNF473Q8WTR7 871 aaKnown RBP15.72■□□□□ 0.11
NCL-207ENST00000461347 EDEM3Q9BZQ6 932 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 NOC2LQ9Y3T9 749 aaKnown RBP15.72■□□□□ 0.11
NCL-207ENST00000461347 PNMA6FA0A0J9YX94 578 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 STX2P32856 288 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 UBXN2AP68543 259 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 AMPD2Q01433 879 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 SP4Q02446 784 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 FAM182BQ5T319 152 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 FBXO11Q86XK2 927 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 SPZ1Q9BXG8 430 aa15.72■□□□□ 0.11
NCL-207ENST00000461347 MYO1FO00160 1098 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 KCNQ2O43526 872 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 SYF2O95926 243 aaKnown RBP15.71■□□□□ 0.11
NCL-207ENST00000461347 ATP5DP30049 168 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 SNAP25P60880 206 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 DR1Q01658 176 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 EVX2Q03828 476 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 C10orf76Q5T2E6 689 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 MTMR8Q96EF0 704 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 EPN3Q9H201 632 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 NFAT5O94916 1531 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 ALS2Q96Q42 1657 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 A0A087X0T9 212 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 hCG_1984214I3L0E3 225 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 FAM228BP0C875 321 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 ZBTB16Q05516 673 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 DOK7Q18PE1 504 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 USP37Q86T82 979 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 ZNF713Q8N859 430 aaPredicted RBP15.71■□□□□ 0.11
NCL-207ENST00000461347 NEDD1Q8NHV4 660 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 ZMYND12Q9H0C1 365 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 PARP2Q9UGN5 583 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 CHUKO15111 745 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 TMOD1P28289 359 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 ANO3Q9BYT9 981 aa15.71■□□□□ 0.11
NCL-207ENST00000461347 GRID2IPA4D2P6 1211 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 ATP2B4P23634 1241 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 PSMC2P35998 433 aaKnown RBP15.7■□□□□ 0.1
NCL-207ENST00000461347 PPP2R2AP63151 447 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 CCDC127Q96BQ5 260 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 ACTR5Q9H9F9 607 aaPredicted RBP15.7■□□□□ 0.1
NCL-207ENST00000461347 MAD2L2Q9UI95 211 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 USTQ9Y2C2 406 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 USP17L10C9JJH3 530 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 GLI1P08151 1106 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 IL17AQ16552 155 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 SPICE1Q8N0Z3 855 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 MTRQ99707 1265 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 ELAC2Q9BQ52 826 aaKnown RBP15.7■□□□□ 0.1
NCL-207ENST00000461347 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.7■□□□□ 0.13e-10■□□□□ 10.7
NCL-207ENST00000461347 TRIM7Q9C029 511 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 TACC3Q9Y6A5 838 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 TULP2O00295 520 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 RASA1P20936 1047 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 ATP11AP98196 1134 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 BIRC3Q13489 604 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 NEDD9Q14511 834 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 KIAA0825Q8IV33 1275 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 CNPY4Q8N129 248 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 PIGOQ8TEQ8 1089 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 DNAJC17Q9NVM6 304 aaKnown RBP15.7■□□□□ 0.1
NCL-207ENST00000461347 FAM53CQ9NYF3 392 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 THRAP3Q9Y2W1 955 aaKnown RBP15.7■□□□□ 0.1
NCL-207ENST00000461347 CAMTA1Q9Y6Y1 1673 aa15.7■□□□□ 0.1
NCL-207ENST00000461347 SLC9A1P19634 815 aa15.69■□□□□ 0.1
NCL-207ENST00000461347 AARSP49588 968 aaKnown RBP eCLIP15.69■□□□□ 0.13e-7■□□□□ 11.1
NCL-207ENST00000461347 MYL7Q01449 175 aa15.69■□□□□ 0.1
NCL-207ENST00000461347 ICA1Q05084 483 aa15.69■□□□□ 0.1
NCL-207ENST00000461347 OTUD6AQ7L8S5 288 aa15.69■□□□□ 0.1
NCL-207ENST00000461347 FBXO33Q7Z6M2 555 aa15.69■□□□□ 0.1
NCL-207ENST00000461347 IRF2BP1Q8IU81 584 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms