RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 STAT2P52630 851 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 CMTR1Q8N1G2 835 aaKnown RBP9.66□□□□□ -0.86
BRCA1-205ENST00000461221 SFMBT1Q9UHJ3 866 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 SLCO1A2P46721 670 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 GRIN1Q05586 938 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 PPP4R4Q6NUP7 873 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 ZC3H18Q86VM9 953 aaKnown RBP9.66□□□□□ -0.86
BRCA1-205ENST00000461221 SULF1Q8IWU6 871 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 KIF2CQ99661 725 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 MTRQ99707 1265 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 UBE2TQ9NPD8 197 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-205ENST00000461221 NDE1Q9NXR1 346 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 PRKAG2Q9UGJ0 569 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 RWDD2AQ9UIY3 292 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 SATB2Q9UPW6 733 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 A0A1W2PP64 1363 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 TEX14Q8IWB6 1497 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 WDR91A4D1P6 747 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 CHL1O00533 1208 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 PODXLO00592 558 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 GYG2O15488 501 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 KRT38O76015 456 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 A1BGP04217 495 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 GOLGA8HP0CJ92 632 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 RWDD2BP57060 319 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 TMPRSS15P98073 1019 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 TFAMQ00059 246 aaKnown RBP9.66□□□□□ -0.86
BRCA1-205ENST00000461221 DMTNQ08495 405 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 IMPG1Q17R60 797 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 RHOT2Q8IXI1 618 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 ARHGAP18Q8N392 663 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 CYTH2Q99418 400 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 EPAS1Q99814 870 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 RNF26Q9BY78 433 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-205ENST00000461221 FNDC3AQ9Y2H6 1198 aaKnown RBP9.66□□□□□ -0.86
BRCA1-205ENST00000461221 CLIC4Q9Y696 253 aa9.66□□□□□ -0.86
BRCA1-205ENST00000461221 ARHGAP10A1A4S6 786 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 SEMA3EO15041 775 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 GFPT2O94808 682 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 TJP3O95049 919 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 ELF1P32519 619 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 AARSP49588 968 aaKnown RBP eCLIP9.65□□□□□ -0.86
BRCA1-205ENST00000461221 ARL4CP56559 192 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 ZBED6P86452 979 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 ACBD5Q5T8D3 534 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-205ENST00000461221 NBPF10Q6P3W6 841 aaKnown RBP9.65□□□□□ -0.86
BRCA1-205ENST00000461221 EMBQ6PCB8 327 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 FAM133AQ8N9E0 248 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 GANCQ8TET4 914 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 TEKT4Q8WW24 435 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 EXT2Q93063 718 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 FAF2Q96CS3 445 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 HACD3Q9P035 362 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 CCDC188H7C350 402 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 FMNL1O95466 1100 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-205ENST00000461221 APOA1P02647 267 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 SLC39A14Q15043 492 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 NBPF9Q3BBW0 867 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 OTUB1Q96FW1 271 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-205ENST00000461221 OLFM3Q96PB7 478 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 PITPNM3Q9BZ71 974 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 PPARGC1AQ9UBK2 798 aaKnown RBP9.65□□□□□ -0.86
BRCA1-205ENST00000461221 NDUFB9Q9Y6M9 179 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 CTIFO43310 598 aaKnown RBP9.65□□□□□ -0.86
BRCA1-205ENST00000461221 CHGBP05060 677 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 ADD1P35611 737 aaKnown RBP9.65□□□□□ -0.86
BRCA1-205ENST00000461221 MXI1P50539 228 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 C7orf31Q8N865 590 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 TTC13Q8NBP0 860 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 MAGEB5Q9BZ81 275 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 DNAJC17Q9NVM6 304 aaKnown RBP9.65□□□□□ -0.86
BRCA1-205ENST00000461221 STOML1Q9UBI4 398 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 NESP48681 1621 aa9.65□□□□□ -0.86
BRCA1-205ENST00000461221 GOLGA8MH3BSY2 632 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 LRRN2O75325 713 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 FTCDO95954 541 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 BLVRAP53004 296 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 DAB2P98082 770 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 CAV1Q03135 178 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 MORF4L2Q15014 288 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 KLHL38Q2WGJ6 581 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 PPP4R3CPQ6ZMV5 832 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 SLC26A7Q8TE54 656 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 SUGT1Q9Y2Z0 365 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 PCDHA13Q9Y5I0 950 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 EIF4G3O43432 1585 aaKnown RBP9.65□□□□□ -0.87
BRCA1-205ENST00000461221 RECQLP46063 649 aaPredicted RBP9.65□□□□□ -0.87
BRCA1-205ENST00000461221 RNF219Q5W0B1 726 aaPredicted RBP9.65□□□□□ -0.87
BRCA1-205ENST00000461221 SZRD1Q7Z422 152 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 PODNQ7Z5L7 613 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 ARHGEF25Q86VW2 580 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 CEP170P1Q96L14 293 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 HEXIM2Q96MH2 286 aaKnown RBP9.65□□□□□ -0.87
BRCA1-205ENST00000461221 EDEM3Q9BZQ6 932 aa9.65□□□□□ -0.87
BRCA1-205ENST00000461221 NHEJ1Q9H9Q4 299 aaPredicted RBP9.65□□□□□ -0.87
BRCA1-205ENST00000461221 EDC4Q6P2E9 1401 aaKnown RBP9.64□□□□□ -0.87
BRCA1-205ENST00000461221 NSUN2Q08J23 767 aaKnown RBP eCLIP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms