RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 IL17RAQ96F46 866 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 MXRA8Q9BRK3 442 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 C1QTNF1Q9BXJ1 281 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 FAM49AQ9H0Q0 323 aaPredicted RBP17.26■□□□□ 0.35
COL16A1-206ENST00000461217 RIC8AQ9NPQ8 531 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 KCNH7Q9NS40 1196 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 CDY2AQ9Y6F7 541 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 TTC28Q96AY4 2481 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 TRANK1O15050 2925 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 COL4A6Q14031 1691 aa17.26■□□□□ 0.35
COL16A1-206ENST00000461217 KLF18A0A0U1RQI7 1052 aa17.25■□□□□ 0.35
COL16A1-206ENST00000461217 H3BNC9 293 aa17.25■□□□□ 0.35
COL16A1-206ENST00000461217 M0QZ92 97 aa17.25■□□□□ 0.35
COL16A1-206ENST00000461217 FOSP01100 380 aaPredicted RBP17.25■□□□□ 0.35
COL16A1-206ENST00000461217 LPIN1Q14693 890 aa17.25■□□□□ 0.35
COL16A1-206ENST00000461217 DHX32Q7L7V1 743 aaKnown RBP17.25■□□□□ 0.35
COL16A1-206ENST00000461217 ANO3Q9BYT9 981 aa17.25■□□□□ 0.35
COL16A1-206ENST00000461217 BRPF3Q9ULD4 1205 aa17.25■□□□□ 0.35
COL16A1-206ENST00000461217 V9GY48 417 aaPredicted RBP17.25■□□□□ 0.35
COL16A1-206ENST00000461217 MBLAC1A4D2B0 266 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-206ENST00000461217 RRN3P2A6NIE6 340 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 hCG_1984214I3L0E3 225 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 RPLP2P05387 115 aaKnown RBP17.24■□□□□ 0.35
COL16A1-206ENST00000461217 INSRRP14616 1297 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 CTNNB1P35222 781 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 ZNF76P36508 570 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 ACTR2P61160 394 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 MRPS6P82932 125 aaKnown RBP17.24■□□□□ 0.35
COL16A1-206ENST00000461217 MGAT3Q09327 533 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 KRT32Q14532 448 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 TYW1BQ6NUM6 668 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 EP400NLQ6ZTU2 488 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 ZNF713Q8N859 430 aaPredicted RBP17.24■□□□□ 0.35
COL16A1-206ENST00000461217 BANK1Q8NDB2 785 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 CYP2W1Q8TAV3 490 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 ZBTB10Q96DT7 871 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 RAPGEFL1Q9UHV5 662 aa17.24■□□□□ 0.35
COL16A1-206ENST00000461217 ADGRA3Q8IWK6 1321 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 REV3LO60673 3130 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 NLRC5Q86WI3 1866 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 SMCO2A6NFE2 343 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 STXBP3O00186 592 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 EPB41L2O43491 1005 aaKnown RBP17.23■□□□□ 0.35
COL16A1-206ENST00000461217 ARP10275 920 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 EXOSC10Q01780 885 aaKnown RBP17.23■□□□□ 0.35
COL16A1-206ENST00000461217 ADCK5Q3MIX3 580 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 CEP55Q53EZ4 464 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 FBXO47Q5MNV8 452 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 MARCH8Q5T0T0 291 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 IER5Q5VY09 327 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 TSHZ1Q6ZSZ6 1077 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 PCYT2Q99447 389 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 TSHZ2Q9NRE2 1034 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 TMEM260Q9NX78 707 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 KAT6AQ92794 2004 aa17.23■□□□□ 0.35
COL16A1-206ENST00000461217 NFASCO94856 1347 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.22■□□□□ 0.35
COL16A1-206ENST00000461217 DDX39AO00148 427 aaKnown RBP17.22■□□□□ 0.35
COL16A1-206ENST00000461217 SEC24BO95487 1268 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 STAT5BP51692 787 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 TMEM62Q0P6H9 643 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 AP3B2Q13367 1082 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 LEXMQ3ZCV2 418 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 TEX2Q8IWB9 1127 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 RASEFQ8IZ41 740 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 TRAPPC12Q8WVT3 735 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 GLT8D2Q9H1C3 349 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 NSUN3Q9H649 340 aaKnown RBP17.22■□□□□ 0.35
COL16A1-206ENST00000461217 AGO4Q9HCK5 861 aaKnown RBP17.22■□□□□ 0.35
COL16A1-206ENST00000461217 BARHL2Q9NY43 387 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 RWDD3Q9Y3V2 267 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 TRPV2Q9Y5S1 764 aa17.22■□□□□ 0.35
COL16A1-206ENST00000461217 ENPP3O14638 875 aa17.21■□□□□ 0.35
COL16A1-206ENST00000461217 BACH1O14867 736 aa17.21■□□□□ 0.35
COL16A1-206ENST00000461217 HMGB1P09429 215 aaKnown RBP17.21■□□□□ 0.35
COL16A1-206ENST00000461217 CD52P31358 61 aa17.21■□□□□ 0.35
COL16A1-206ENST00000461217 SREBF1P36956 1147 aa17.21■□□□□ 0.35
COL16A1-206ENST00000461217 METAP2P50579 478 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL16A1-206ENST00000461217 FUT2Q10981 343 aa17.21■□□□□ 0.35
COL16A1-206ENST00000461217 ITGB3BPQ13352 177 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-206ENST00000461217 BTG3Q14201 252 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-206ENST00000461217 PLCB4Q15147 1175 aa17.21■□□□□ 0.35
COL16A1-206ENST00000461217 TCEAL5Q5H9L2 206 aa17.21■□□□□ 0.35
COL16A1-206ENST00000461217 PLPPR4Q7Z2D5 763 aa17.21■□□□□ 0.35
COL16A1-206ENST00000461217 C11orf84Q9BUA3 381 aaPredicted RBP17.21■□□□□ 0.35
COL16A1-206ENST00000461217 EPHX3Q9H6B9 360 aa17.21■□□□□ 0.35
COL16A1-206ENST00000461217 POTEB3A0JP26 581 aa17.2■□□□□ 0.34
COL16A1-206ENST00000461217 CSPG5O95196 566 aa17.2■□□□□ 0.34
COL16A1-206ENST00000461217 CDC27P30260 824 aa17.2■□□□□ 0.34
COL16A1-206ENST00000461217 PAK2Q13177 524 aa17.2■□□□□ 0.34
COL16A1-206ENST00000461217 TSGA10IPQ3SY00 556 aa17.2■□□□□ 0.34
COL16A1-206ENST00000461217 JAKMIP3Q5VZ66 844 aa17.2■□□□□ 0.34
COL16A1-206ENST00000461217 PTCRAQ6ISU1 281 aaPredicted RBP17.2■□□□□ 0.34
COL16A1-206ENST00000461217 POTEBQ6S5H4 581 aa17.2■□□□□ 0.34
COL16A1-206ENST00000461217 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.2■□□□□ 0.34
COL16A1-206ENST00000461217 AGO3Q9H9G7 860 aaKnown RBP17.2■□□□□ 0.34
COL16A1-206ENST00000461217 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
COL16A1-206ENST00000461217 H3BQ06 376 aaPredicted RBP17.19■□□□□ 0.34
COL16A1-206ENST00000461217 RB1P06400 928 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms