RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 MLXIPQ9HAP2 919 aa16.2■□□□□ 0.18
COL5A3-202ENST00000461214 TRIP12Q14669 1992 aaPredicted RBP16.2■□□□□ 0.18
COL5A3-202ENST00000461214 EMSYQ7Z589 1322 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 SYNRGQ9UMZ2 1314 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 VWA3AA6NCI4 1184 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 NOP56O00567 594 aaKnown RBP16.19■□□□□ 0.18
COL5A3-202ENST00000461214 SLC26A4O43511 780 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 HOXD8P13378 290 aaPredicted RBP16.19■□□□□ 0.18
COL5A3-202ENST00000461214 CST5P28325 142 aaPredicted RBP16.19■□□□□ 0.18
COL5A3-202ENST00000461214 CPT1AP50416 773 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 C9orf50Q5SZB4 431 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 HAUS3Q68CZ6 603 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 ERMNQ8TAM6 284 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 CHAMP1Q96JM3 812 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 AP5M1Q9H0R1 490 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 UNC45AQ9H3U1 944 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 SPC25Q9HBM1 224 aa16.19■□□□□ 0.18
COL5A3-202ENST00000461214 POTEMA6NI47 508 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 DDX39AO00148 427 aaKnown RBP16.18■□□□□ 0.18
COL5A3-202ENST00000461214 CCNE2O96020 404 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 MARCKSP29966 332 aaPredicted RBP16.18■□□□□ 0.18
COL5A3-202ENST00000461214 TECP42680 631 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 ME1P48163 572 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 GJA9P57773 515 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 ACTR2P61160 394 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 BRDTQ58F21 947 aaPredicted RBP16.18■□□□□ 0.18
COL5A3-202ENST00000461214 NCAPH2Q6IBW4 605 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 MIER3Q7Z3K6 550 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 USP38Q8NB14 1042 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 COPS5Q92905 334 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 GJA10Q969M2 543 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 SPATA33Q96N06 139 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 GPR20Q99678 358 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 XPNPEP3Q9NQH7 507 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 LRWD1Q9UFC0 647 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 IGSF9BQ9UPX0 1349 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 KDM3AQ9Y4C1 1321 aa16.18■□□□□ 0.18
COL5A3-202ENST00000461214 PRUNE2Q8WUY3 3088 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 A6NJR5 290 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 GOLGA6L22H0YM25 854 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 CHMP2AO43633 222 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 ADAMTS4O75173 837 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 ATG7O95352 703 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 PSAPP07602 524 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 MMP3P08254 477 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 MUTP22033 750 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 TXLNAP40222 546 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 IL17AQ16552 155 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 HSDL1Q3SXM5 330 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 GJC2Q5T442 439 aaPredicted RBP16.17■□□□□ 0.18
COL5A3-202ENST00000461214 LHX8Q68G74 356 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 MIS18BP1Q6P0N0 1132 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 SEPT1Q8WYJ6 367 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 LENG1Q96BZ8 264 aaPredicted RBP16.17■□□□□ 0.18
COL5A3-202ENST00000461214 PRDM5Q9NQX1 630 aaPredicted RBP16.17■□□□□ 0.18
COL5A3-202ENST00000461214 DISC1Q9NRI5 854 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 PCDHA7Q9UN72 937 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 PCDHA10Q9Y5I2 948 aa16.17■□□□□ 0.18
COL5A3-202ENST00000461214 IGKV6D-21A0A0A0MT36 114 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 A0A1W2PQ27 194 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 A0A1W2PQ64 194 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 A0A1W2PQD8 194 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 SUPT20HL2P0C7V6 817 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 TCF7P36402 384 aaPredicted RBP16.16■□□□□ 0.18
COL5A3-202ENST00000461214 EPHA7Q15375 998 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 DGKDQ16760 1214 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 AXDND1Q5T1B0 1012 aaPredicted RBP16.16■□□□□ 0.18
COL5A3-202ENST00000461214 TMEM63BQ5T3F8 832 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 ADALQ6DHV7 355 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 KCTD17Q8N5Z5 321 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 AFAP1L1Q8TED9 768 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 PPM1EQ8WY54 764 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 UIMC1Q96RL1 719 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 GDPD2Q9HCC8 539 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 ATP11BQ9Y2G3 1177 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 SAMM50Q9Y512 469 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 TANC1Q9C0D5 1861 aa16.16■□□□□ 0.18
COL5A3-202ENST00000461214 SIP14410 1827 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 EML1O00423 815 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 DYNC1LI2O43237 492 aaPredicted RBP16.15■□□□□ 0.18
COL5A3-202ENST00000461214 ZEB2O60315 1214 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 KPNA6O60684 536 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 DKC1O60832 514 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL5A3-202ENST00000461214 LGR5O75473 907 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 C6orf222P0C671 652 aaPredicted RBP16.15■□□□□ 0.18
COL5A3-202ENST00000461214 SLC26A2P50443 739 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 RTP1P59025 263 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 SMAD3P84022 425 aaKnown RBP16.15■□□□□ 0.18
COL5A3-202ENST00000461214 SP4Q02446 784 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 GRIN1Q05586 938 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 FSCN1Q16658 493 aaKnown RBP16.15■□□□□ 0.18
COL5A3-202ENST00000461214 FAM160B1Q5W0V3 765 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 KRT79Q5XKE5 535 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 ABHD15Q6UXT9 468 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 RNF180Q86T96 592 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 AFG1LQ8WV93 481 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 ATP6V0A1Q93050 837 aa16.15■□□□□ 0.18
COL5A3-202ENST00000461214 POLR3CQ9BUI4 534 aaPredicted RBP16.15■□□□□ 0.18
COL5A3-202ENST00000461214 CCSER1Q9C0I3 900 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms