RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 TCEAL9Q9UHQ7 104 aa26.09■■□□□ 1.77
PTPN4-208ENST00000460289 IGKV6D-21A0A0A0MT36 114 aa26.08■■□□□ 1.77
PTPN4-208ENST00000460289 CCNE2O96020 404 aa26.08■■□□□ 1.77
PTPN4-208ENST00000460289 C8orf34Q49A92 452 aa26.08■■□□□ 1.77
PTPN4-208ENST00000460289 FAM160B1Q5W0V3 765 aa26.08■■□□□ 1.77
PTPN4-208ENST00000460289 MIS18BP1Q6P0N0 1132 aa26.08■■□□□ 1.77
PTPN4-208ENST00000460289 ABHD15Q6UXT9 468 aa26.08■■□□□ 1.77
PTPN4-208ENST00000460289 GTF3C6Q969F1 213 aa26.08■■□□□ 1.77
PTPN4-208ENST00000460289 CDX2Q99626 313 aaPredicted RBP26.08■■□□□ 1.77
PTPN4-208ENST00000460289 ORC3Q9UBD5 711 aaPredicted RBP26.08■■□□□ 1.77
PTPN4-208ENST00000460289 ABHD14A-ACY1A0A1B0GW23 586 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 M0R2N6 131 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 BACH1O14867 736 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 EFCAB14O75071 495 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 CTDNEP1O95476 244 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 KCNJ6P48051 423 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 IKBKEQ14164 716 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 ZNF746Q6NUN9 644 aaPredicted RBP26.07■■□□□ 1.76
PTPN4-208ENST00000460289 RSPH3Q86UC2 560 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 NECAB1Q8N987 351 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 PHF20Q9BVI0 1012 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 TUBE1Q9UJT0 475 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 KCNJ14Q9UNX9 436 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 TRPC6Q9Y210 931 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 PCDHA11Q9Y5I1 949 aa26.07■■□□□ 1.76
PTPN4-208ENST00000460289 MBLAC1A4D2B0 266 aaPredicted RBP26.06■■□□□ 1.76
PTPN4-208ENST00000460289 INSRRP14616 1297 aa26.06■■□□□ 1.76
PTPN4-208ENST00000460289 KRT76Q01546 638 aa26.06■■□□□ 1.76
PTPN4-208ENST00000460289 MBTPS1Q14703 1052 aa26.06■■□□□ 1.76
PTPN4-208ENST00000460289 NONOQ15233 471 aaKnown RBP eCLIP26.06■■□□□ 1.76
PTPN4-208ENST00000460289 NPY5RQ15761 445 aa26.06■■□□□ 1.76
PTPN4-208ENST00000460289 KRT25Q7Z3Z0 450 aa26.06■■□□□ 1.76
PTPN4-208ENST00000460289 RPAINQ86UA6 219 aa26.06■■□□□ 1.76
PTPN4-208ENST00000460289 SMAP1Q8IYB5 467 aaPredicted RBP26.06■■□□□ 1.76
PTPN4-208ENST00000460289 LENG9Q96B70 501 aa26.06■■□□□ 1.76
PTPN4-208ENST00000460289 SLC28A3Q9HAS3 691 aa26.06■■□□□ 1.76
PTPN4-208ENST00000460289 POTEB3A0JP26 581 aa26.05■■□□□ 1.76
PTPN4-208ENST00000460289 EDIL3O43854 480 aa26.05■■□□□ 1.76
PTPN4-208ENST00000460289 RPLP2P05387 115 aaKnown RBP26.05■■□□□ 1.76
PTPN4-208ENST00000460289 PLCB4Q15147 1175 aa26.05■■□□□ 1.76
PTPN4-208ENST00000460289 POTEBQ6S5H4 581 aa26.05■■□□□ 1.76
PTPN4-208ENST00000460289 UIMC1Q96RL1 719 aa26.05■■□□□ 1.76
PTPN4-208ENST00000460289 ZNF302Q9NR11 478 aa26.05■■□□□ 1.76
PTPN4-208ENST00000460289 PCDHA10Q9Y5I2 948 aa26.05■■□□□ 1.76
PTPN4-208ENST00000460289 KAT6AQ92794 2004 aa26.05■■□□□ 1.76
PTPN4-208ENST00000460289 CYP3A7-CYP3A51PA0A087WV96 503 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 KIF28PB7ZC32 967 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 MSH4O15457 936 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 LARGE1O95461 756 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 CTSHP09668 335 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 CYP3A7P24462 503 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 RABGGTBP53611 331 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 IGBP1P78318 339 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 Q4G0T1 1027 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 FAM26DQ5JW98 314 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 MARCH8Q5T0T0 291 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 SWSAP1Q6NVH7 229 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 RIT2Q99578 217 aa26.04■■□□□ 1.76
PTPN4-208ENST00000460289 TET1Q8NFU7 2136 aa26.03■■□□□ 1.76
PTPN4-208ENST00000460289 CCDC194A0A1B0GVG4 234 aa26.03■■□□□ 1.76
PTPN4-208ENST00000460289 PSAPP07602 524 aa26.03■■□□□ 1.76
PTPN4-208ENST00000460289 WDR5P61964 334 aaKnown RBP26.03■■□□□ 1.76
PTPN4-208ENST00000460289 MOXD1Q6UVY6 613 aa26.03■■□□□ 1.76
PTPN4-208ENST00000460289 RUFY4Q6ZNE9 571 aa26.03■■□□□ 1.76
PTPN4-208ENST00000460289 HERC6Q8IVU3 1022 aa26.03■■□□□ 1.76
PTPN4-208ENST00000460289 NKX2-4Q9H2Z4 354 aa26.03■■□□□ 1.76
PTPN4-208ENST00000460289 LIMCH1Q9UPQ0 1083 aa26.03■■□□□ 1.76
PTPN4-208ENST00000460289 YBX2Q9Y2T7 364 aaKnown RBP26.03■■□□□ 1.76
PTPN4-208ENST00000460289 HBP1O60381 514 aa26.02■■□□□ 1.76
PTPN4-208ENST00000460289 FDPSP14324 419 aaKnown RBP26.02■■□□□ 1.76
PTPN4-208ENST00000460289 GRIN2CQ14957 1233 aa26.02■■□□□ 1.76
PTPN4-208ENST00000460289 PLEKHG4Q58EX7 1191 aa26.02■■□□□ 1.76
PTPN4-208ENST00000460289 PDXDC2PQ6P474 469 aa26.02■■□□□ 1.76
PTPN4-208ENST00000460289 CCDC60Q8IWA6 550 aaPredicted RBP26.02■■□□□ 1.76
PTPN4-208ENST00000460289 DBF4BQ8NFT6 615 aa26.02■■□□□ 1.76
PTPN4-208ENST00000460289 ATP8B4Q8TF62 1192 aa26.02■■□□□ 1.76
PTPN4-208ENST00000460289 SEPT8Q92599 483 aa26.02■■□□□ 1.76
PTPN4-208ENST00000460289 SAMM50Q9Y512 469 aa26.02■■□□□ 1.76
PTPN4-208ENST00000460289 NSUN7Q8NE18 718 aaKnown RBP26.01■■□□□ 1.75
PTPN4-208ENST00000460289 SLC5A5Q92911 643 aa26.01■■□□□ 1.75
PTPN4-208ENST00000460289 PCDHA2Q9Y5H9 948 aa26.01■■□□□ 1.75
PTPN4-208ENST00000460289 MAFBQ9Y5Q3 323 aaPredicted RBP26.01■■□□□ 1.75
PTPN4-208ENST00000460289 WDR64B1ANS9 1081 aa26■■□□□ 1.75
PTPN4-208ENST00000460289 GAS7O60861 476 aa26■■□□□ 1.75
PTPN4-208ENST00000460289 INF2Q27J81 1249 aa26■■□□□ 1.75
PTPN4-208ENST00000460289 LRCH2Q5VUJ6 765 aa26■■□□□ 1.75
PTPN4-208ENST00000460289 CKAP2LQ8IYA6 745 aa26■■□□□ 1.75
PTPN4-208ENST00000460289 DNAJB3Q8WWF6 145 aa26■■□□□ 1.75
PTPN4-208ENST00000460289 MYLIPQ8WY64 445 aa26■■□□□ 1.75
PTPN4-208ENST00000460289 TEKT3Q9BXF9 490 aa26■■□□□ 1.75
PTPN4-208ENST00000460289 BRMS1Q9HCU9 246 aa26■■□□□ 1.75
PTPN4-208ENST00000460289 GJB4Q9NTQ9 266 aa26■■□□□ 1.75
PTPN4-208ENST00000460289 DTNBO60941 627 aa25.99■■□□□ 1.75
PTPN4-208ENST00000460289 TDP2O95551 362 aa25.99■■□□□ 1.75
PTPN4-208ENST00000460289 CHRNA1P02708 482 aa25.99■■□□□ 1.75
PTPN4-208ENST00000460289 SFNP31947 248 aa25.99■■□□□ 1.75
PTPN4-208ENST00000460289 TCTN1Q2MV58 587 aa25.99■■□□□ 1.75
PTPN4-208ENST00000460289 ZNF484Q5JVG2 852 aa25.99■■□□□ 1.75
PTPN4-208ENST00000460289 IER5Q5VY09 327 aa25.99■■□□□ 1.75
PTPN4-208ENST00000460289 PPP2R2DQ66LE6 453 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms