RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 ZSWIM8A7E2V4 1837 aa13.83□□□□□ -0.2
HDAC4-206ENST00000460235 POTEMA6NI47 508 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 PRPF40AO75400 957 aaKnown RBP13.82□□□□□ -0.2
HDAC4-206ENST00000460235 LGR5O75473 907 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 MMP3P08254 477 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 GNAT1P11488 350 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 HOXD8P13378 290 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-206ENST00000460235 AMPD3Q01432 767 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 SPIRE1Q08AE8 756 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 HSDL1Q3SXM5 330 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 RRAGBQ5VZM2 374 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 RESP18Q5W5W9 173 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 SWSAP1Q6NVH7 229 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 KANK3Q6NY19 840 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 TPH2Q8IWU9 490 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 C4orf19Q8IY42 314 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 ANKLE1Q8NAG6 615 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 COPS5Q92905 334 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 JPH2Q9BR39 696 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-206ENST00000460235 MTG1Q9BT17 334 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-206ENST00000460235 MCOLN1Q9GZU1 580 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 UNC93B1Q9H1C4 597 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 MAGEF1Q9HAY2 307 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 GABBR1Q9UBS5 961 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 STK17AQ9UEE5 414 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 SYNRGQ9UMZ2 1314 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 MYH15Q9Y2K3 1946 aa13.82□□□□□ -0.2
HDAC4-206ENST00000460235 LRRC37A2A6NM11 1700 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 IGKV6D-21A0A0A0MT36 114 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 GSTTP1A0A1W2PQM5 241 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 LYPLA2O95372 231 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 MBD3O95983 291 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 CCNE2O96020 404 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 TFRCP02786 760 aaKnown RBP13.81□□□□□ -0.2
HDAC4-206ENST00000460235 MYCNP04198 464 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-206ENST00000460235 MYL3P08590 195 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 XKR3Q5GH77 459 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 AXDND1Q5T1B0 1012 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-206ENST00000460235 UTP14CQ5TAP6 766 aaKnown RBP13.81□□□□□ -0.2
HDAC4-206ENST00000460235 CEP57L1Q8IYX8 460 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 BBXQ8WY36 941 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-206ENST00000460235 SYMPKQ92797 1274 aaKnown RBP13.81□□□□□ -0.2
HDAC4-206ENST00000460235 GLT1D1Q96MS3 346 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 DEFB118Q96PH6 123 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 UIMC1Q96RL1 719 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 HSD17B14Q9BPX1 270 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 GDPD2Q9HCC8 539 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 BMP2KQ9NSY1 1161 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-206ENST00000460235 KCNH3Q9ULD8 1083 aa13.81□□□□□ -0.2
HDAC4-206ENST00000460235 MAFBQ9Y5Q3 323 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-206ENST00000460235 RRN3P2A6NIE6 340 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 H3BRB1 525 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 DNM1LO00429 736 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 HBP1O60381 514 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 SGPL1O95470 568 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 PGK1P00558 417 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 LGALS2P05162 132 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 RPLP2P05387 115 aaKnown RBP13.8□□□□□ -0.2
HDAC4-206ENST00000460235 STAT6P42226 847 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 SYKP43405 635 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 ZRSR1Q15695 479 aaKnown RBP13.8□□□□□ -0.2
HDAC4-206ENST00000460235 IL17AQ16552 155 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 SKOR2Q2VWA4 1001 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-206ENST00000460235 HYIQ5T013 277 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 FSIP1Q8NA03 581 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 KLHDC9Q8NEP7 349 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 GJA10Q969M2 543 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 VTI1AQ96AJ9 217 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 DYDC2Q96IM9 177 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 CLIC6Q96NY7 704 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 LXNQ9BS40 222 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 TUT1Q9H6E5 874 aaKnown RBP13.8□□□□□ -0.2
HDAC4-206ENST00000460235 ANKEF1Q9NU02 776 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 KCNG1Q9UIX4 513 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 OGDHLQ9ULD0 1010 aa13.8□□□□□ -0.2
HDAC4-206ENST00000460235 POTEB3A0JP26 581 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 EML1O00423 815 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 SORBS3O60504 671 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 KINO60870 393 aaKnown RBP13.79□□□□□ -0.2
HDAC4-206ENST00000460235 ADAMTS4O75173 837 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 SLITRK3O94933 977 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 MCM4P33991 863 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 FAM160A1Q05DH4 1040 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 LRRC41Q15345 812 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 ZNF484Q5JVG2 852 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 GJC2Q5T442 439 aaPredicted RBP13.79□□□□□ -0.2
HDAC4-206ENST00000460235 LHX8Q68G74 356 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 POTEBQ6S5H4 581 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 CATSPER3Q86XQ3 398 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 ATP8B4Q8TF62 1192 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 U2AF1L4Q8WU68 220 aaKnown RBP13.79□□□□□ -0.2
HDAC4-206ENST00000460235 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 DBR1Q9UK59 544 aaKnown RBP13.79□□□□□ -0.2
HDAC4-206ENST00000460235 KIAA1024Q9UPX6 916 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 TRPC6Q9Y210 931 aa13.79□□□□□ -0.2
HDAC4-206ENST00000460235 FAM237AA0A1B0GTK4 181 aa13.78□□□□□ -0.2
HDAC4-206ENST00000460235 MAGEB2O15479 319 aa13.78□□□□□ -0.2
HDAC4-206ENST00000460235 GAS2O43903 313 aaKnown RBP13.78□□□□□ -0.2
HDAC4-206ENST00000460235 F2P00734 622 aa13.78□□□□□ -0.2
HDAC4-206ENST00000460235 OATP04181 439 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms