RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 PPP2R5CQ13362 524 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 NCAPH2Q6IBW4 605 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 PDXDC2PQ6P474 469 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 NFRKBQ6P4R8 1299 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 CKAP2LQ8IYA6 745 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 RDM1Q8NG50 284 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 MTMR9Q96QG7 549 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 PCYT2Q99447 389 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 ZSCAN16Q9H4T2 348 aaPredicted RBP12.23□□□□□ -0.45
CCDC12-204ENST00000460035 TTC12Q9H892 705 aaPredicted RBP12.23□□□□□ -0.45
CCDC12-204ENST00000460035 ERAP1Q9NZ08 941 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 HDAC6Q9UBN7 1215 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 GABBR1Q9UBS5 961 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 VAV3Q9UKW4 847 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 NR2E3Q9Y5X4 410 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 SIP14410 1827 aa12.23□□□□□ -0.45
CCDC12-204ENST00000460035 TET1Q8NFU7 2136 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 MROH7Q68CQ1 1323 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 EML1O00423 815 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 ZSCAN22P10073 491 aaPredicted RBP12.22□□□□□ -0.45
CCDC12-204ENST00000460035 TECP42680 631 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 PTPN11Q06124 597 aaPredicted RBP12.22□□□□□ -0.45
CCDC12-204ENST00000460035 FAM173BQ6P4H8 233 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 PLPPR4Q7Z2D5 763 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 ANKRD33Q7Z3H0 272 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 SESTD1Q86VW0 696 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 AFAP1L1Q8TED9 768 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 TOX2Q96NM4 488 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 TRPV6Q9H1D0 765 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 RNPEPQ9H4A4 650 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 PRDM5Q9NQX1 630 aaPredicted RBP12.22□□□□□ -0.45
CCDC12-204ENST00000460035 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.22□□□□□ -0.45
CCDC12-204ENST00000460035 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 NOD1Q9Y239 953 aa12.22□□□□□ -0.45
CCDC12-204ENST00000460035 C17orf102A2RUQ5 167 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 LAD1O00515 517 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 SMIM10L2AP0DMW4 78 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 SMIM10L2BP0DMW5 78 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 SLC26A2P50443 739 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 IGBP1P78318 339 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 CEBPZQ03701 1054 aaKnown RBP12.21□□□□□ -0.45
CCDC12-204ENST00000460035 SPIRE1Q08AE8 756 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 PKP1Q13835 747 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 PLCB4Q15147 1175 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 EPHA7Q15375 998 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 TMEM266Q2M3C6 531 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 FOXD4L6Q3SYB3 417 aaPredicted RBP12.21□□□□□ -0.45
CCDC12-204ENST00000460035 GDF6Q6KF10 455 aaPredicted RBP12.21□□□□□ -0.45
CCDC12-204ENST00000460035 FOXD4L3Q6VB84 417 aaPredicted RBP12.21□□□□□ -0.45
CCDC12-204ENST00000460035 CCDC60Q8IWA6 550 aaPredicted RBP12.21□□□□□ -0.45
CCDC12-204ENST00000460035 C4orf32Q8N8J7 132 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 TNPO1Q92973 898 aaKnown RBP12.21□□□□□ -0.45
CCDC12-204ENST00000460035 TRMT13Q9NUP7 481 aaKnown RBP12.21□□□□□ -0.45
CCDC12-204ENST00000460035 TMEM39AQ9NV64 488 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 SETD4Q9NVD3 440 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 PRKAG2Q9UGJ0 569 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 CEP131Q9UPN4 1083 aa12.21□□□□□ -0.45
CCDC12-204ENST00000460035 IGSF9BQ9UPX0 1349 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 F13A1P00488 732 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 CLTBP09497 229 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 GNAT1P11488 350 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 SYN1P17600 705 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 HOXC8P31273 242 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 PRPHP41219 470 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 ZNF200P98182 395 aaPredicted RBP12.2□□□□□ -0.46
CCDC12-204ENST00000460035 ATP2C1P98194 919 aaPredicted RBP12.2□□□□□ -0.46
CCDC12-204ENST00000460035 FAAP100Q0VG06 881 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 PPFIA1Q13136 1202 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 SF3A1Q15459 793 aaKnown RBP12.2□□□□□ -0.46
CCDC12-204ENST00000460035 PTGISQ16647 500 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 DTHD1Q6ZMT9 781 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 FAM126BQ8IXS8 530 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 BANK1Q8NDB2 785 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 ZNF396Q96N95 335 aaPredicted RBP12.2□□□□□ -0.46
CCDC12-204ENST00000460035 NRBP2Q9NSY0 501 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 GTF2IRD1Q9UHL9 959 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 ZMYND8Q9ULU4 1186 aaPredicted RBP12.2□□□□□ -0.46
CCDC12-204ENST00000460035 MAFBQ9Y5Q3 323 aaPredicted RBP12.2□□□□□ -0.46
CCDC12-204ENST00000460035 CLIC4Q9Y696 253 aa12.2□□□□□ -0.46
CCDC12-204ENST00000460035 DDX11L8A8MPP1 907 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 HBP1O60381 514 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 B4GALT4O60513 344 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 BMP15O95972 392 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 CD4P01730 458 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 P4HBP07237 508 aaKnown RBP12.19□□□□□ -0.46
CCDC12-204ENST00000460035 CYP2C9P11712 490 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 INSRRP14616 1297 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 QARSP47897 775 aaKnown RBP12.19□□□□□ -0.46
CCDC12-204ENST00000460035 PSMC5P62195 406 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 CTTNQ14247 550 aaKnown RBP12.19□□□□□ -0.46
CCDC12-204ENST00000460035 UGCGQ16739 394 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 SH3RF1Q7Z6J0 888 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 TPH2Q8IWU9 490 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 ATP8B4Q8TF62 1192 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 ATP6V0A1Q93050 837 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 DYDC2Q96IM9 177 aa12.19□□□□□ -0.46
CCDC12-204ENST00000460035 EIF2AK1Q9BQI3 630 aaKnown RBP12.19□□□□□ -0.46
CCDC12-204ENST00000460035 RGL1Q9NZL6 768 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms