RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 FRMD3A2A2Y4 597 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 CTAGE9A4FU28 777 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 ANKRD65E5RJM6 399 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 APAF1O14727 1248 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 FSCN2O14926 492 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 GAS2O43903 313 aaKnown RBP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 XYLBO75191 536 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 MICAL2O94851 1124 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 KIF4AO95239 1232 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 SYF2O95926 243 aaKnown RBP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 LINGO3P0C6S8 592 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 MAP4P27816 1152 aaKnown RBP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 RXRBP28702 533 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 ATICP31939 592 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 TCF7P36402 384 aaPredicted RBP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 CSE1LP55060 971 aaKnown RBP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 OXCT1P55809 520 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 POU5F1Q01860 360 aaKnown RBP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 TUBA3CQ13748 450 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 ADRM1Q16186 407 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 CCDC14Q49A88 953 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 SLC44A4Q53GD3 710 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 CCDC122Q5T0U0 273 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 TTC22Q5TAA0 569 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 TMCO4Q5TGY1 634 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 KLC3Q6P597 504 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 NLRP9Q7RTR0 991 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 ZNF554Q86TJ5 538 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 SHISA5Q8N114 240 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 TRIML1Q8N9V2 468 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 NSUN7Q8NE18 718 aaKnown RBP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 DIS3LQ8TF46 1054 aaKnown RBP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 GIMAP1Q8WWP7 306 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 NACC2Q96BF6 587 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 RUNDC1Q96C34 613 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 IFT74Q96LB3 600 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 PRAM1Q96QH2 718 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 UPF3BQ9BZI7 483 aaKnown RBP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 SYNCQ9H7C4 482 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 KAT14Q9H8E8 782 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 TMEM165Q9HC07 324 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 PAK6Q9NQU5 681 aaPredicted RBP6.15□□□□□ -1.42
HMGB4-202ENST00000458277 RMND1Q9NWS8 449 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 HOXC10Q9NYD6 342 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 IL20Q9NYY1 176 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 PDP2Q9P2J9 529 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 CFAP45Q9UL16 551 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 CNPY2Q9Y2B0 182 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 HIF3AQ9Y2N7 669 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 COMMD3-BMI1R4GMX3 469 aa6.15□□□□□ -1.42
HMGB4-202ENST00000458277 TSPOAP1O95153 1857 aa6.15□□□□□ -1.43
HMGB4-202ENST00000458277 ADGRL1O94910 1474 aa6.15□□□□□ -1.43
HMGB4-202ENST00000458277 KDM6BO15054 1643 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 DNMT1P26358 1616 aaKnown RBP6.14□□□□□ -1.43
HMGB4-202ENST00000458277 CDC42BPBQ9Y5S2 1711 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 IQCA1LA6NCM1 817 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 TBKBP1A7MCY6 615 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 B8ZZF3 427 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 BTBD19C9JJ37 291 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 TM4SF5O14894 197 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 CYP26A1O43174 497 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 MARCH6O60337 910 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 DIAPH2O60879 1101 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 HSF2BPO75031 334 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 ADAM11O75078 769 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 SKAP2O75563 359 aaPredicted RBP6.14□□□□□ -1.43
HMGB4-202ENST00000458277 RAPGEF3O95398 923 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 ALOX15P16050 662 aaPredicted RBP6.14□□□□□ -1.43
HMGB4-202ENST00000458277 HOXD10P28358 340 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 MLH1P40692 756 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 PMS2P54278 862 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 LACTBP83111 547 aaPredicted RBP6.14□□□□□ -1.43
HMGB4-202ENST00000458277 ATP11AP98196 1134 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 SLC7A5Q01650 507 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 ATP2B2Q01814 1243 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 KLC1Q07866 573 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 MYO1EQ12965 1108 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 DGKZQ13574 1117 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 EIF4A2Q14240 407 aaKnown RBP6.14□□□□□ -1.43
HMGB4-202ENST00000458277 NONOQ15233 471 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB4-202ENST00000458277 E2F5Q15329 346 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 GLE1Q53GS7 698 aaKnown RBP6.14□□□□□ -1.43
HMGB4-202ENST00000458277 BOLA3Q53S33 107 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 SGO2Q562F6 1265 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 ANKRD34AQ69YU3 496 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 ADALQ6DHV7 355 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 C6orf89Q6UWU4 347 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 PACS1Q6VY07 963 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 KDM7AQ6ZMT4 941 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 CMTR1Q8N1G2 835 aaKnown RBP6.14□□□□□ -1.43
HMGB4-202ENST00000458277 RETREG2Q8NC44 543 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 RRP36Q96EU6 259 aaKnown RBP6.14□□□□□ -1.43
HMGB4-202ENST00000458277 ZNF594Q96JF6 807 aaPredicted RBP6.14□□□□□ -1.43
HMGB4-202ENST00000458277 SNX27Q96L92 541 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 CTAGE1Q96RT6 745 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 OSBPL10Q9BXB5 764 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 SLC5A4Q9NY91 659 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 IL1RAPL1Q9NZN1 696 aa6.14□□□□□ -1.43
HMGB4-202ENST00000458277 RABL2AQ9UBK7 228 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms