RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983		Q96M66	194 aa		5.74	□□□□□ -1.49
COL21A1-204	ENST00000456983	SYT17	Q9BSW7	474 aa		5.74	□□□□□ -1.49
COL21A1-204	ENST00000456983	PUS3	Q9BZE2	481 aa	Known RBP	5.74	□□□□□ -1.49
COL21A1-204	ENST00000456983	MBD1	Q9UIS9	605 aa	Predicted RBP	5.74	□□□□□ -1.49
COL21A1-204	ENST00000456983	MAST2	Q6P0Q8	1798 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	KLRG2	A4D1S0	409 aa	Predicted RBP	5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	UFL1	O94874	794 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	KCNA3	P22001	575 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	ARL4A	P40617	200 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	RPS8	P62241	208 aa	Known RBP	5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	ATP8B2	P98198	1209 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	EFEMP1	Q12805	493 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	CCDC93	Q567U6	631 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	DALRD3	Q5D0E6	543 aa	Known RBP	5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	TTBK2	Q6IQ55	1244 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	LDHAL6A	Q6ZMR3	332 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	TMC7	Q7Z402	723 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	ZDHHC14	Q8IZN3	488 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	LINC01356	Q8N9X3	169 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	FEZF2	Q8TBJ5	459 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	SSH3	Q8TE77	659 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	RNF141	Q8WVD5	230 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	CCDC136	Q96JN2	1154 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	FRMD6	Q96NE9	622 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	GPR101	Q96P66	508 aa	Predicted RBP	5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	CRAMP1	Q96RY5	1269 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	TMX4	Q9H1E5	349 aa	Predicted RBP	5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	AK9	Q5TCS8	1911 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	SNED1	Q8TER0	1413 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	MROH5	Q6ZUA9	1318 aa		5.73	□□□□□ -1.49
COL21A1-204	ENST00000456983	COL4A5	P29400	1685 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	DICER1	Q9UPY3	1922 aa	Known RBP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	ZNF646	O15015	1829 aa	Predicted RBP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	PSME4	Q14997	1843 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	SSU72P8	A0A1W2PR75	194 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	EYA2	O00167	538 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	SMARCA5	O60264	1052 aa	Predicted RBP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	CILP	O75339	1184 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	TAF5L	O75529	589 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	MPO	P05164	745 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	KLRK1	P26718	216 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	ALDH1B1	P30837	517 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	KIR2DL1	P43626	348 aa	Predicted RBP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	KIR2DL2	P43627	348 aa	Predicted RBP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	GPSM2	P81274	684 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	CHRND	Q07001	517 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	TIGD5	Q53EQ6	642 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	DPP8	Q6V1X1	898 aa	Predicted RBP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	RNF111	Q6ZNA4	994 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	CCDC82	Q8N4S0	544 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	ENOX1	Q8TC92	643 aa	Known RBP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	CYB5D2	Q8WUJ1	264 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	RWDD1	Q9H446	243 aa	Predicted RBP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	IL1RAPL2	Q9NP60	686 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	COPRS	Q9NQ92	184 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	TJP2	Q9UDY2	1190 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	ZMYM5	Q9UJ78	669 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	TTF2	Q9UNY4	1162 aa	Known RBP	5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	ATP6V0A2	Q9Y487	856 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	SBF1	O95248	1867 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	XDH	P47989	1333 aa		5.72	□□□□□ -1.49
COL21A1-204	ENST00000456983	SCN9A	Q15858	1988 aa		5.71	□□□□□ -1.49
COL21A1-204	ENST00000456983	ADAMTSL1	Q8N6G6	1762 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	SNAP23	O00161	211 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	CIAO1	O76071	339 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	IGHD	P01880	384 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	CELA3A	P09093	270 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	IL15	P40933	162 aa	Predicted RBP	5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	TNNI2	P48788	182 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	TFCP2	Q12800	502 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	HDAC1	Q13547	482 aa	Predicted RBP	5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	PUM3	Q15397	648 aa	Known RBP	5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	GPR162	Q16538	588 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	ATP2B3	Q16720	1220 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	ATG9A	Q7Z3C6	839 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	TMC4	Q7Z404	712 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	AACS	Q86V21	672 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	ERC1	Q8IUD2	1116 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	DNAJB8	Q8NHS0	232 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	GAL3ST3	Q96A11	431 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	BDH2	Q9BUT1	245 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	TAOK3	Q9H2K8	898 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	BIN2	Q9UBW5	565 aa	Predicted RBP	5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	MINPP1	Q9UNW1	487 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	GTF3C3	Q9Y5Q9	886 aa		5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	COL1A1	P02452	1464 aa	Predicted RBP	5.71	□□□□□ -1.5
COL21A1-204	ENST00000456983	MYH7	P12883	1935 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	CHD4	Q14839	1912 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	MED23	Q9ULK4	1368 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983		A0A1B0GUL7	405 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	WTIP	A6NIX2	430 aa	Predicted RBP	5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	TREH	O43280	583 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	PPIP5K2	O43314	1243 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	BBOX1	O75936	387 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	SLC5A1	P13866	664 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	INSRR	P14616	1297 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	PNLIP	P16233	465 aa		5.7	□□□□□ -1.5
COL21A1-204	ENST00000456983	ENDOU	P21128	410 aa	Known RBP	5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms