RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 CNOT10Q9H9A5 744 aaKnown RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 BARHL2Q9NY43 387 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 TBC1D7Q9P0N9 293 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 TRPC6Q9Y210 931 aa11.26□□□□□ -0.61
CLIP4-208ENST00000456385 COL1A1P02452 1464 aaPredicted RBP11.26□□□□□ -0.61
CLIP4-208ENST00000456385 A0A0G2JS52 829 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 CES2O00748 559 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 DIAPH2O60879 1101 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 IFNAR2P48551 515 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 IFI35P80217 286 aaPredicted RBP11.25□□□□□ -0.61
CLIP4-208ENST00000456385 SUSD4Q5VX71 490 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 CRELD2Q6UXH1 353 aaPredicted RBP11.25□□□□□ -0.61
CLIP4-208ENST00000456385 TRPM8Q7Z2W7 1104 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 L3MBTL3Q96JM7 780 aaPredicted RBP11.25□□□□□ -0.61
CLIP4-208ENST00000456385 SLC4A9Q96Q91 983 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 NUCKS1Q9H1E3 243 aaKnown RBP11.25□□□□□ -0.61
CLIP4-208ENST00000456385 EPB41L4BQ9H329 900 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 GOPCQ9HD26 462 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 KCNMB3Q9NPA1 279 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 ARAP2Q8WZ64 1704 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 USP17L3A6NCW0 530 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 USP17L4A6NCW7 530 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 POTEMA6NI47 508 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 EIF4E1BA6NMX2 242 aaKnown RBP11.25□□□□□ -0.61
CLIP4-208ENST00000456385 A8MUI8 341 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 PCP11498 1178 aaKnown RBP11.25□□□□□ -0.61
CLIP4-208ENST00000456385 IRX1P78414 480 aaPredicted RBP11.25□□□□□ -0.61
CLIP4-208ENST00000456385 TFAP4Q01664 338 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 ASIC2Q16515 512 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 C11orf91Q3C1V1 193 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 USP17L1Q7RTZ2 530 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 ADAT2Q7Z6V5 191 aaKnown RBP11.25□□□□□ -0.61
CLIP4-208ENST00000456385 NELFCDQ8IXH7 590 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 SPICE1Q8N0Z3 855 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 DAGLBQ8NCG7 672 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 ATP8B4Q8TF62 1192 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 CENPTQ96BT3 561 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 CALR3Q96L12 384 aaKnown RBP11.25□□□□□ -0.61
CLIP4-208ENST00000456385 SPAG5Q96R06 1193 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 FMO2Q99518 471 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 AIPL1Q9NZN9 384 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLIP4-208ENST00000456385 CD2APQ9Y5K6 639 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 PAPPAQ13219 1627 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 SLIT2O94813 1529 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 ADAMTSL3P82987 1691 aa11.25□□□□□ -0.61
CLIP4-208ENST00000456385 LRP5O75197 1615 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 PVALEFA0A1B0GWK0 134 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 ASAP2O43150 1006 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 VIMP08670 466 aaKnown RBP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 FKBP3Q00688 224 aaKnown RBP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 BIRC2Q13490 618 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 RIPK1Q13546 671 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 ZKSCAN8Q15776 578 aaPredicted RBP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 ZCWPW2Q504Y3 356 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 PEX26Q7Z412 305 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 DZIP3Q86Y13 1208 aaKnown RBP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 ARMC2Q8NEN0 867 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 TPCN2Q8NHX9 752 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 UHMK1Q8TAS1 419 aaKnown RBP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 TBCKQ8TEA7 893 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 SEC14L1Q92503 715 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 TSG101Q99816 390 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 UTP11Q9Y3A2 253 aaKnown RBP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 ENO4A6NNW6 628 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 PPFIA2O75334 1257 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 UBOX5O94941 541 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 UPP2O95045 317 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 GSTA1P08263 222 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 USP17L8P0C7I0 530 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 IGHMBP2P38935 993 aaKnown RBP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 MMP13P45452 471 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 ALDH5A1P51649 535 aaPredicted RBP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 NAPAP54920 295 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 ZNF268Q14587 947 aaPredicted RBP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 ITIH4Q14624 930 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 NONOQ15233 471 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 IRF2BP2Q7Z5L9 587 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 DAAM2Q86T65 1068 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 ZNF34Q8IZ26 560 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 MYOCDQ8IZQ8 938 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 KIF2BQ8N4N8 673 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 DYNLL2Q96FJ2 89 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 TXLNGYQ9BZA5 131 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 AZI2Q9H6S1 392 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 SAMD15Q9P1V8 674 aa11.24□□□□□ -0.61
CLIP4-208ENST00000456385 BIN2Q9UBW5 565 aaPredicted RBP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLIP4-208ENST00000456385 DLEC1Q9Y238 1755 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 MYH1P12882 1939 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 SMCO2A6NFE2 343 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 CCDC188H7C350 402 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 FGGP02679 453 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 RARAP10276 462 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 CYP19A1P11511 503 aaPredicted RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 IL2RBP14784 551 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 TRHP20396 242 aaPredicted RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 POU5F1Q01860 360 aaKnown RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 ECM1Q16610 540 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 CDCA2Q69YH5 1023 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms