RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ATG7O95352 703 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 CA3P07451 260 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 FAM86B2P0C5J1 330 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 CIITAP33076 1130 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 PLEKHG4Q58EX7 1191 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 SEPT8Q92599 483 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 APBB2Q92870 758 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 TBC1D22BQ9NU19 505 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 VPS54Q9P1Q0 977 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 IPO5O00410 1097 aaKnown RBP20.3■□□□□ 0.84
MSH6-207ENST00000456246 MYOGP15173 224 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 STAT5BP51692 787 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 NLRP5P59047 1200 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 ANKRD1Q15327 319 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 FAM160B1Q5W0V3 765 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 GALNT17Q6IS24 598 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 DBF4BQ8NFT6 615 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 PCYT2Q99447 389 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 ZNF577Q9BSK1 485 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 ZBED2Q9BTP6 218 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 TRPC6Q9Y210 931 aa20.3■□□□□ 0.84
MSH6-207ENST00000456246 GJB5O95377 273 aa20.29■□□□□ 0.84
MSH6-207ENST00000456246 AMHP03971 560 aa20.29■□□□□ 0.84
MSH6-207ENST00000456246 CTSHP09668 335 aa20.29■□□□□ 0.84
MSH6-207ENST00000456246 MIS18BP1Q6P0N0 1132 aa20.29■□□□□ 0.84
MSH6-207ENST00000456246 MICAL3Q7RTP6 2002 aa20.29■□□□□ 0.84
MSH6-207ENST00000456246 PTPRSQ13332 1948 aa20.28■□□□□ 0.84
MSH6-207ENST00000456246 IGKV6D-21A0A0A0MT36 114 aa20.28■□□□□ 0.84
MSH6-207ENST00000456246 INSRRP14616 1297 aa20.28■□□□□ 0.84
MSH6-207ENST00000456246 USP11P51784 963 aa20.28■□□□□ 0.84
MSH6-207ENST00000456246 DEFB103AP81534 67 aa20.28■□□□□ 0.84
MSH6-207ENST00000456246 KRT76Q01546 638 aa20.28■□□□□ 0.84
MSH6-207ENST00000456246 ZNF746Q6NUN9 644 aaPredicted RBP20.28■□□□□ 0.84
MSH6-207ENST00000456246 SMAP1Q8IYB5 467 aaPredicted RBP20.28■□□□□ 0.84
MSH6-207ENST00000456246 IL17RAQ96F46 866 aa20.28■□□□□ 0.84
MSH6-207ENST00000456246 RAD9AQ99638 391 aa20.28■□□□□ 0.84
MSH6-207ENST00000456246 SLKQ9H2G2 1235 aaPredicted RBP20.28■□□□□ 0.84
MSH6-207ENST00000456246 PCDHA4Q9UN74 947 aa20.28■□□□□ 0.84
MSH6-207ENST00000456246 BACH1O14867 736 aa20.27■□□□□ 0.84
MSH6-207ENST00000456246 DHX15O43143 795 aaKnown RBP20.27■□□□□ 0.84
MSH6-207ENST00000456246 PPFIA3O75145 1194 aa20.27■□□□□ 0.84
MSH6-207ENST00000456246 STK3Q13188 491 aa20.27■□□□□ 0.84
MSH6-207ENST00000456246 MKRN4PQ13434 485 aaPredicted RBP20.27■□□□□ 0.84
MSH6-207ENST00000456246 PLCB4Q15147 1175 aa20.27■□□□□ 0.84
MSH6-207ENST00000456246 MARCH8Q5T0T0 291 aa20.27■□□□□ 0.84
MSH6-207ENST00000456246 ABHD15Q6UXT9 468 aa20.27■□□□□ 0.84
MSH6-207ENST00000456246 DAGLBQ8NCG7 672 aa20.27■□□□□ 0.84
MSH6-207ENST00000456246 RASGRP4Q8TDF6 673 aa20.27■□□□□ 0.84
MSH6-207ENST00000456246 IFIH1Q9BYX4 1025 aaKnown RBP20.27■□□□□ 0.84
MSH6-207ENST00000456246 CHD7Q9P2D1 2997 aa20.27■□□□□ 0.83
MSH6-207ENST00000456246 STK36Q9NRP7 1315 aa20.27■□□□□ 0.83
MSH6-207ENST00000456246 COL1A2P08123 1366 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 POTEB3A0JP26 581 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 DDX39AO00148 427 aaKnown RBP20.26■□□□□ 0.83
MSH6-207ENST00000456246 HBP1O60381 514 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 CCNE2O96020 404 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 XBP1P17861 261 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 TAP1Q03518 808 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 TCTN1Q2MV58 587 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 PRR16Q569H4 304 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 IER5Q5VY09 327 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 POTEBQ6S5H4 581 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 RUFY4Q6ZNE9 571 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 ZNF302Q9NR11 478 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 PCDHA2Q9Y5H9 948 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 A0A0C4DFX4 3053 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 CUL9Q8IWT3 2517 aa20.26■□□□□ 0.83
MSH6-207ENST00000456246 UNC80Q8N2C7 3258 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 EYSQ5T1H1 3165 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 M0QZ92 97 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 ADAMTS3O15072 1205 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 IGFBP4P22692 258 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 IGBP1P78318 339 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 MGAT3Q09327 533 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 ADGRE1Q14246 886 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 MYOCDQ8IZQ8 938 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 BLIDQ8IZY5 108 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 USP38Q8NB14 1042 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 ATP8B4Q8TF62 1192 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 DNAJB3Q8WWF6 145 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 LARP6Q9BRS8 491 aaKnown RBP20.25■□□□□ 0.83
MSH6-207ENST00000456246 INSL6Q9Y581 213 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 SQORQ9Y6N5 450 aa20.25■□□□□ 0.83
MSH6-207ENST00000456246 GTPBP6O43824 516 aaPredicted RBP20.24■□□□□ 0.83
MSH6-207ENST00000456246 PFKFB2O60825 505 aa20.24■□□□□ 0.83
MSH6-207ENST00000456246 CHRNA1P02708 482 aa20.24■□□□□ 0.83
MSH6-207ENST00000456246 PSAPP07602 524 aa20.24■□□□□ 0.83
MSH6-207ENST00000456246 POU3F3P20264 500 aaPredicted RBP20.24■□□□□ 0.83
MSH6-207ENST00000456246 MRPS6P82932 125 aaKnown RBP20.24■□□□□ 0.83
MSH6-207ENST00000456246 SCRN1Q12765 414 aa20.24■□□□□ 0.83
MSH6-207ENST00000456246 PDXDC2PQ6P474 469 aa20.24■□□□□ 0.83
MSH6-207ENST00000456246 FAM43BQ6ZT52 329 aaPredicted RBP20.24■□□□□ 0.83
MSH6-207ENST00000456246 CCDC60Q8IWA6 550 aaPredicted RBP20.24■□□□□ 0.83
MSH6-207ENST00000456246 NME8Q8N427 588 aa20.24■□□□□ 0.83
MSH6-207ENST00000456246 LENG9Q96B70 501 aa20.24■□□□□ 0.83
MSH6-207ENST00000456246 RIT2Q99578 217 aa20.24■□□□□ 0.83
MSH6-207ENST00000456246 PCDHA10Q9Y5I2 948 aa20.24■□□□□ 0.83
MSH6-207ENST00000456246 SMIM35A0A1B0GVV1 85 aa20.23■□□□□ 0.83
MSH6-207ENST00000456246 WDR64B1ANS9 1081 aa20.23■□□□□ 0.83
MSH6-207ENST00000456246 ZNF484Q5JVG2 852 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms