RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 PCDHA6Q9UN73 950 aa19.2■□□□□ 0.66
TVP23A-202ENST00000456096 PCDHA8Q9Y5H6 950 aa19.2■□□□□ 0.66
TVP23A-202ENST00000456096 C5orf67F2Z3F1 127 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 SLC27A2O14975 620 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 RB1P06400 928 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 LINC00271P0C7V0 271 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 BMPR1AP36894 532 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 IGBP1P78318 339 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 COL19A1Q14993 1142 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 FBXO47Q5MNV8 452 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 FANCBQ8NB91 859 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 LRRC2Q9BYS8 371 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 ARIH1Q9Y4X5 557 aaPredicted RBP19.19■□□□□ 0.66
TVP23A-202ENST00000456096 SLC12A7Q9Y666 1083 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 CDY2AQ9Y6F7 541 aa19.19■□□□□ 0.66
TVP23A-202ENST00000456096 TTC3P53804 2025 aa19.18■□□□□ 0.66
TVP23A-202ENST00000456096 GRM6O15303 877 aa19.18■□□□□ 0.66
TVP23A-202ENST00000456096 MAFGO15525 162 aa19.18■□□□□ 0.66
TVP23A-202ENST00000456096 CREB3L3Q68CJ9 461 aa19.18■□□□□ 0.66
TVP23A-202ENST00000456096 TMTC3Q6ZXV5 915 aa19.18■□□□□ 0.66
TVP23A-202ENST00000456096 HEATR3Q7Z4Q2 680 aa19.18■□□□□ 0.66
TVP23A-202ENST00000456096 PCYT2Q99447 389 aa19.18■□□□□ 0.66
TVP23A-202ENST00000456096 AGO3Q9H9G7 860 aaKnown RBP19.18■□□□□ 0.66
TVP23A-202ENST00000456096 RC3H2Q9HBD1 1191 aaKnown RBP19.18■□□□□ 0.66
TVP23A-202ENST00000456096 CLDND1Q9NY35 253 aa19.18■□□□□ 0.66
TVP23A-202ENST00000456096 ADGRA3Q8IWK6 1321 aa19.18■□□□□ 0.66
TVP23A-202ENST00000456096 ATG2AQ2TAZ0 1938 aa19.17■□□□□ 0.66
TVP23A-202ENST00000456096 INSRRP14616 1297 aa19.17■□□□□ 0.66
TVP23A-202ENST00000456096 MRPS6P82932 125 aaKnown RBP19.17■□□□□ 0.66
TVP23A-202ENST00000456096 TSHZ1Q6ZSZ6 1077 aa19.17■□□□□ 0.66
TVP23A-202ENST00000456096 CLP1Q92989 425 aaKnown RBP19.17■□□□□ 0.66
TVP23A-202ENST00000456096 C11orf84Q9BUA3 381 aaPredicted RBP19.17■□□□□ 0.66
TVP23A-202ENST00000456096 FAM49AQ9H0Q0 323 aaPredicted RBP19.17■□□□□ 0.66
TVP23A-202ENST00000456096 JPH1Q9HDC5 661 aaPredicted RBP19.17■□□□□ 0.66
TVP23A-202ENST00000456096 MUC6Q6W4X9 2439 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 RRN3P2A6NIE6 340 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 CD52P31358 61 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 LTBRP36941 435 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 BTG3Q14201 252 aaPredicted RBP19.16■□□□□ 0.66
TVP23A-202ENST00000456096 NECTIN1Q15223 517 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 MICU3Q86XE3 530 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 CYP2W1Q8TAV3 490 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 ZNF689Q96CS4 500 aaPredicted RBP19.16■□□□□ 0.66
TVP23A-202ENST00000456096 ESYT1Q9BSJ8 1104 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 LMAN2LQ9H0V9 348 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 KCNH7Q9NS40 1196 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 RWDD3Q9Y3V2 267 aa19.16■□□□□ 0.66
TVP23A-202ENST00000456096 WDFY4Q6ZS81 3184 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 POTEB3A0JP26 581 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 NCK2O43639 380 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 DGKIO75912 1065 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 ALADP13716 330 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 TMEM62Q0P6H9 643 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 IER5Q5VY09 327 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 POTEBQ6S5H4 581 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 RTN4RL1Q86UN2 441 aaPredicted RBP19.15■□□□□ 0.66
TVP23A-202ENST00000456096 SGMS1Q86VZ5 419 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 LINC01599Q8WXQ3 324 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 MXRA8Q9BRK3 442 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 AZI2Q9H6S1 392 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 SLC9A2Q9UBY0 812 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 FAM50BQ9Y247 325 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 LOXHD1Q8IVV2 1947 aa19.15■□□□□ 0.66
TVP23A-202ENST00000456096 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
TVP23A-202ENST00000456096 HYAL1Q12794 435 aa19.14■□□□□ 0.65
TVP23A-202ENST00000456096 PLCB4Q15147 1175 aa19.14■□□□□ 0.65
TVP23A-202ENST00000456096 CTC1Q2NKJ3 1217 aa19.14■□□□□ 0.65
TVP23A-202ENST00000456096 WWC2Q6AWC2 1192 aa19.14■□□□□ 0.65
TVP23A-202ENST00000456096 TYW1BQ6NUM6 668 aa19.14■□□□□ 0.65
TVP23A-202ENST00000456096 TRAPPC12Q8WVT3 735 aa19.14■□□□□ 0.65
TVP23A-202ENST00000456096 ALG13Q9NP73 1137 aaKnown RBP19.14■□□□□ 0.65
TVP23A-202ENST00000456096 TRPC6Q9Y210 931 aa19.14■□□□□ 0.65
TVP23A-202ENST00000456096 PRR33A8MZF0 331 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 CSPG5O95196 566 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 RPLP2P05387 115 aaKnown RBP19.13■□□□□ 0.65
TVP23A-202ENST00000456096 ARP10275 920 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 ACTR2P61160 394 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 ZP2Q05996 745 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 DLX2Q07687 328 aaPredicted RBP19.13■□□□□ 0.65
TVP23A-202ENST00000456096 CLUL1Q15846 466 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 SYNE3Q6ZMZ3 975 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 CRIPAKQ8N1N5 446 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 PGBD1Q96JS3 809 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 SDF4Q9BRK5 362 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 ANO2Q9NQ90 1003 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 PRKAG3Q9UGI9 489 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 PCDHA2Q9Y5H9 948 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 TRPV2Q9Y5S1 764 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 MRPL42Q9Y6G3 142 aaKnown RBP19.13■□□□□ 0.65
TVP23A-202ENST00000456096 SQORQ9Y6N5 450 aa19.13■□□□□ 0.65
TVP23A-202ENST00000456096 PIEZO1Q92508 2521 aa19.12■□□□□ 0.65
TVP23A-202ENST00000456096 NFASCO94856 1347 aa19.12■□□□□ 0.65
TVP23A-202ENST00000456096 CNTNAP5Q8WYK1 1306 aa19.12■□□□□ 0.65
TVP23A-202ENST00000456096 GTF2F1P35269 517 aaKnown RBP eCLIP19.12■□□□□ 0.65
TVP23A-202ENST00000456096 STAT5BP51692 787 aa19.12■□□□□ 0.65
TVP23A-202ENST00000456096 NAPAP54920 295 aa19.12■□□□□ 0.65
TVP23A-202ENST00000456096 ITGB3BPQ13352 177 aaPredicted RBP19.12■□□□□ 0.65
TVP23A-202ENST00000456096 CAMK1Q14012 370 aa19.12■□□□□ 0.65
TVP23A-202ENST00000456096 CEP55Q53EZ4 464 aa19.12■□□□□ 0.65
TVP23A-202ENST00000456096 PLPPR4Q7Z2D5 763 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms