RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 DIS3Q9Y2L1 958 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-210ENST00000454859 ARID2Q68CP9 1835 aa7.59□□□□□ -1.19
ECHDC1-210ENST00000454859 TESPA1A2RU30 521 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 PDXKO00764 312 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 TBCAO75347 108 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 KRT18P05783 430 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 SFPQP23246 707 aaKnown RBP eCLIP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 PBX1P40424 430 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 TERF1P54274 439 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 INHBEP58166 350 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 TTLL12Q14166 644 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 FILIP1Q7Z7B0 1213 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 CCDC84Q86UT8 332 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 LRRC8AQ8IWT6 810 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 TBC1D5Q92609 795 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 OPTNQ96CV9 577 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 TAAR1Q96RJ0 339 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 ASCC2Q9H1I8 757 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 A1CFQ9NQ94 594 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 CTNND2Q9UQB3 1225 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 TRAF3IP3Q9Y228 551 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 PCDHA2Q9Y5H9 948 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 PCDHA10Q9Y5I2 948 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 POTEB3A0JP26 581 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 GOLGA6L9A6NEM1 432 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 ASB14A6NK59 587 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 KCNJ18B7U540 433 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 CALUO43852 315 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 ATG7O95352 703 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 PSAPP07602 524 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 FECHP22830 423 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 MCCD1P59942 119 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 MOGSQ13724 837 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 GIT2Q14161 759 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 KCNJ12Q14500 433 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 NEDD9Q14511 834 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 ARID5BQ14865 1188 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 POTEBQ6S5H4 581 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 NSMFQ6X4W1 530 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 SLC30A10Q6XR72 485 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 GADL1Q6ZQY3 521 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 C1orf186Q6ZWK4 172 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 EPM2AIP1Q7L775 607 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 APTXQ7Z2E3 356 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 CNGA4Q8IV77 575 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 FMNL3Q8IVF7 1028 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 CSGALNACT2Q8N6G5 542 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 FAM133AQ8N9E0 248 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 ZNF507Q8TCN5 953 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 TRIM47Q96LD4 638 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 DRC1Q96MC2 740 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 NUDT12Q9BQG2 462 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 MKNK1Q9BUB5 465 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 MOV10L1Q9BXT6 1211 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 UNC45AQ9H3U1 944 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 ELP3Q9H9T3 547 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 METTL14Q9HCE5 456 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 PCDHB13Q9Y5F0 798 aa7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.58□□□□□ -1.2
ECHDC1-210ENST00000454859 PLXNA1Q9UIW2 1896 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 DNAJC25-GNG10A0A024R161 153 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 ARHGEF35A5YM69 484 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 LGALS16A8MUM7 142 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 POTEB2H3BUK9 544 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 MAPK13O15264 365 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 SLC16A3O15427 465 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 ARP10275 920 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 SLC26A2P50443 739 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 COPB1P53618 953 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 ZCWPW2Q504Y3 356 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 GPAT2Q6NUI2 795 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 RINT1Q6NUQ1 792 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 MIS18BP1Q6P0N0 1132 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 CCDC186Q7Z3E2 898 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 ANKRD35Q8N283 1001 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 KIAA0895Q8NCT3 520 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 KIAA1524Q8TCG1 905 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 LRRC15Q8TF66 581 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 OTUD5Q96G74 571 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 WNK4Q96J92 1243 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 MED15Q96RN5 788 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 NUCKS1Q9H1E3 243 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 PARVGQ9HBI0 331 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 GBA2Q9HCG7 927 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 TBC1D7Q9P0N9 293 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 LARSQ9P2J5 1176 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 A0A1W2PQJ5 194 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 STX10O60499 249 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 KCNA2P16389 499 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 ALDH5A1P51649 535 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 STK4Q13043 487 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 ECM1Q16610 540 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 MAN2A1Q16706 1144 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 ARSHQ5FYA8 562 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 HERC4Q5GLZ8 1057 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 FKBP15Q5T1M5 1219 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 PRAMEF18Q5VWM3 479 aa7.57□□□□□ -1.2
ECHDC1-210ENST00000454859 ISM2Q6H9L7 571 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms