RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PPP2R5CQ13362 524 aa31.57■■■□□ 2.64
SMARCC1-203ENST00000454240 HIC1Q14526 733 aa31.57■■■□□ 2.64
SMARCC1-203ENST00000454240 ZNF174Q15697 407 aa31.57■■■□□ 2.64
SMARCC1-203ENST00000454240 RDM1Q8NG50 284 aa31.57■■■□□ 2.64
SMARCC1-203ENST00000454240 TMEM60Q9H2L4 133 aa31.57■■■□□ 2.64
SMARCC1-203ENST00000454240 SAMM50Q9Y512 469 aa31.57■■■□□ 2.64
SMARCC1-203ENST00000454240 VPS37CA5D8V6 355 aaPredicted RBP31.56■■■□□ 2.64
SMARCC1-203ENST00000454240 BACH1O14867 736 aa31.56■■■□□ 2.64
SMARCC1-203ENST00000454240 CHMP2AO43633 222 aa31.56■■■□□ 2.64
SMARCC1-203ENST00000454240 MARCH6O60337 910 aa31.56■■■□□ 2.64
SMARCC1-203ENST00000454240 MARK3P27448 753 aa31.56■■■□□ 2.64
SMARCC1-203ENST00000454240 SLC26A2P50443 739 aa31.56■■■□□ 2.64
SMARCC1-203ENST00000454240 FAM160B1Q5W0V3 765 aa31.56■■■□□ 2.64
SMARCC1-203ENST00000454240 CTAGE1Q96RT6 745 aa31.56■■■□□ 2.64
SMARCC1-203ENST00000454240 ZNF302Q9NR11 478 aa31.56■■■□□ 2.64
SMARCC1-203ENST00000454240 MAFBQ9Y5Q3 323 aaPredicted RBP31.56■■■□□ 2.64
SMARCC1-203ENST00000454240 CEP290O15078 2479 aa31.55■■■□□ 2.64
SMARCC1-203ENST00000454240 NBR1Q14596 966 aa31.55■■■□□ 2.64
SMARCC1-203ENST00000454240 PTGISQ16647 500 aa31.55■■■□□ 2.64
SMARCC1-203ENST00000454240 RILPL1Q5EBL4 403 aa31.55■■■□□ 2.64
SMARCC1-203ENST00000454240 MIER3Q7Z3K6 550 aa31.55■■■□□ 2.64
SMARCC1-203ENST00000454240 ITGB8P26012 769 aa31.54■■■□□ 2.64
SMARCC1-203ENST00000454240 SPIRE1Q08AE8 756 aa31.54■■■□□ 2.64
SMARCC1-203ENST00000454240 PLCB4Q15147 1175 aa31.54■■■□□ 2.64
SMARCC1-203ENST00000454240 GABBR1Q9UBS5 961 aa31.54■■■□□ 2.64
SMARCC1-203ENST00000454240 PCDHA12Q9UN75 941 aa31.54■■■□□ 2.64
SMARCC1-203ENST00000454240 PCDHB6Q9Y5E3 794 aa31.54■■■□□ 2.64
SMARCC1-203ENST00000454240 C17orf102A2RUQ5 167 aa31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 EML1O00423 815 aa31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 ATP4AP20648 1035 aa31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 ADAM17P78536 824 aa31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 ZNF200P98182 395 aaPredicted RBP31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 PRPF38BQ5VTL8 546 aaKnown RBP31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 PDXDC2PQ6P474 469 aa31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 BRAPQ7Z569 592 aa31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 C4orf32Q8N8J7 132 aa31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 SETD4Q9NVD3 440 aa31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 PCDH10Q9P2E7 1040 aa31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 MTMR6Q9Y217 621 aa31.53■■■□□ 2.64
SMARCC1-203ENST00000454240 NRCAMQ92823 1304 aa31.52■■■□□ 2.64
SMARCC1-203ENST00000454240 IGSF9BQ9UPX0 1349 aa31.52■■■□□ 2.64
SMARCC1-203ENST00000454240 STX6O43752 255 aa31.52■■■□□ 2.64
SMARCC1-203ENST00000454240 CYP2C9P11712 490 aa31.52■■■□□ 2.64
SMARCC1-203ENST00000454240 TTC12Q9H892 705 aaPredicted RBP31.52■■■□□ 2.64
SMARCC1-203ENST00000454240 NOD1Q9Y239 953 aa31.52■■■□□ 2.64
SMARCC1-203ENST00000454240 TIMP1P01033 207 aa31.51■■■□□ 2.63
SMARCC1-203ENST00000454240 GNAT1P11488 350 aa31.51■■■□□ 2.63
SMARCC1-203ENST00000454240 RAG1P15918 1043 aa31.51■■■□□ 2.63
SMARCC1-203ENST00000454240 TXKP42681 527 aa31.51■■■□□ 2.63
SMARCC1-203ENST00000454240 SPRYD3Q8NCJ5 442 aa31.51■■■□□ 2.63
SMARCC1-203ENST00000454240 TNPO1Q92973 898 aaKnown RBP31.51■■■□□ 2.63
SMARCC1-203ENST00000454240 NOC4LQ9BVI4 516 aaKnown RBP31.51■■■□□ 2.63
SMARCC1-203ENST00000454240 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.51■■■□□ 2.63
SMARCC1-203ENST00000454240 POTEB3A0JP26 581 aa31.5■■■□□ 2.63
SMARCC1-203ENST00000454240 PPFIA1Q13136 1202 aa31.5■■■□□ 2.63
SMARCC1-203ENST00000454240 POTEBQ6S5H4 581 aa31.5■■■□□ 2.63
SMARCC1-203ENST00000454240 FERMT3Q86UX7 667 aa31.5■■■□□ 2.63
SMARCC1-203ENST00000454240 ATP8B4Q8TF62 1192 aa31.5■■■□□ 2.63
SMARCC1-203ENST00000454240 LMBR1Q8WVP7 490 aa31.5■■■□□ 2.63
SMARCC1-203ENST00000454240 ATP6V0A1Q93050 837 aa31.5■■■□□ 2.63
SMARCC1-203ENST00000454240 HIPK3Q9H422 1215 aa31.5■■■□□ 2.63
SMARCC1-203ENST00000454240 OR52Z1P0C646 297 aa31.49■■■□□ 2.63
SMARCC1-203ENST00000454240 INSRRP14616 1297 aa31.49■■■□□ 2.63
SMARCC1-203ENST00000454240 RESTQ13127 1097 aa31.49■■■□□ 2.63
SMARCC1-203ENST00000454240 PTK7Q13308 1070 aa31.49■■■□□ 2.63
SMARCC1-203ENST00000454240 UGCGQ16739 394 aa31.49■■■□□ 2.63
SMARCC1-203ENST00000454240 TRPC6Q9Y210 931 aa31.49■■■□□ 2.63
SMARCC1-203ENST00000454240 RRN3P2A6NIE6 340 aa31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 TREHO43280 583 aa31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 ZNF862O60290 1169 aa31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 HBP1O60381 514 aa31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 PDIA4P13667 645 aaKnown RBP31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 PTGDRQ13258 359 aa31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 EPHA7Q15375 998 aa31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 GRIK4Q16099 956 aa31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 SERINC5Q86VE9 423 aa31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 DHX38Q92620 1227 aaKnown RBP31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 BADQ92934 168 aa31.48■■■□□ 2.63
SMARCC1-203ENST00000454240 MAGEA10P43363 369 aaPredicted RBP31.47■■■□□ 2.63
SMARCC1-203ENST00000454240 BECN1Q14457 450 aa31.47■■■□□ 2.63
SMARCC1-203ENST00000454240 MARCH8Q5T0T0 291 aa31.47■■■□□ 2.63
SMARCC1-203ENST00000454240 NCAPH2Q6IBW4 605 aa31.47■■■□□ 2.63
SMARCC1-203ENST00000454240 CKAP2LQ8IYA6 745 aa31.47■■■□□ 2.63
SMARCC1-203ENST00000454240 BBXQ8WY36 941 aaPredicted RBP31.47■■■□□ 2.63
SMARCC1-203ENST00000454240 GDF15Q99988 308 aa31.47■■■□□ 2.63
SMARCC1-203ENST00000454240 PPP1R12CQ9BZL4 782 aa31.47■■■□□ 2.63
SMARCC1-203ENST00000454240 UMODL1Q5DID0 1318 aa31.47■■■□□ 2.63
SMARCC1-203ENST00000454240 MDM2Q00987 491 aaPredicted RBP31.46■■■□□ 2.63
SMARCC1-203ENST00000454240 LBHD1Q9BQE6 289 aaPredicted RBP31.46■■■□□ 2.63
SMARCC1-203ENST00000454240 MBLAC1A4D2B0 266 aaPredicted RBP31.45■■■□□ 2.63
SMARCC1-203ENST00000454240 LAD1O00515 517 aa31.45■■■□□ 2.63
SMARCC1-203ENST00000454240 PITPNM1O00562 1244 aa31.45■■■□□ 2.63
SMARCC1-203ENST00000454240 P4HBP07237 508 aaKnown RBP31.45■■■□□ 2.63
SMARCC1-203ENST00000454240 CYP2C18P33260 490 aa31.45■■■□□ 2.63
SMARCC1-203ENST00000454240 RBL2Q08999 1139 aa31.45■■■□□ 2.63
SMARCC1-203ENST00000454240 MFSD5Q6N075 450 aa31.45■■■□□ 2.63
SMARCC1-203ENST00000454240 CAGE1Q8TC20 777 aa31.45■■■□□ 2.63
SMARCC1-203ENST00000454240 WNT8BQ93098 351 aa31.45■■■□□ 2.63
SMARCC1-203ENST00000454240 FAM167AQ96KS9 214 aa31.45■■■□□ 2.63
SMARCC1-203ENST00000454240 COL1A2P08123 1366 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms