RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 ERVK-24P63145 666 aa23.72■■□□□ 1.39
CTU2-202ENST00000453996 Q3C1V9 767 aa23.72■■□□□ 1.39
CTU2-202ENST00000453996 ZNF746Q6NUN9 644 aaPredicted RBP23.72■■□□□ 1.39
CTU2-202ENST00000453996 RINT1Q6NUQ1 792 aa23.72■■□□□ 1.39
CTU2-202ENST00000453996 APTXQ7Z2E3 356 aaKnown RBP23.72■■□□□ 1.39
CTU2-202ENST00000453996 FAM43AQ8N2R8 423 aa23.72■■□□□ 1.39
CTU2-202ENST00000453996 FAM133AQ8N9E0 248 aa23.72■■□□□ 1.39
CTU2-202ENST00000453996 ANKRD20A12PQ8NF67 263 aa23.72■■□□□ 1.39
CTU2-202ENST00000453996 RDM1Q8NG50 284 aa23.72■■□□□ 1.39
CTU2-202ENST00000453996 MROH8Q9H579 483 aa23.72■■□□□ 1.39
CTU2-202ENST00000453996 LIMA1Q9UHB6 759 aaKnown RBP23.72■■□□□ 1.39
CTU2-202ENST00000453996 NFASCO94856 1347 aa23.72■■□□□ 1.39
CTU2-202ENST00000453996 WDR81Q562E7 1941 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 A0A1B0GTH6 734 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 KCNJ18B7U540 433 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 CYP2C8P10632 490 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 QARSP47897 775 aaKnown RBP23.71■■□□□ 1.39
CTU2-202ENST00000453996 KCNJ12Q14500 433 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 SPRYD7Q5W111 196 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 ANKRD40Q6AI12 368 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 CENPPQ6IPU0 288 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 VSTM4Q8IW00 320 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 MYOCDQ8IZQ8 938 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 CSGALNACT2Q8N6G5 542 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 SMCR8Q8TEV9 937 aaPredicted RBP23.71■■□□□ 1.39
CTU2-202ENST00000453996 DUSP9Q99956 384 aaKnown RBP23.71■■□□□ 1.39
CTU2-202ENST00000453996 SENP7Q9BQF6 1050 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 KCNF1Q9H3M0 494 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 ZHX3Q9H4I2 956 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 KCND2Q9NZV8 630 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 PCDHA2Q9Y5H9 948 aa23.71■■□□□ 1.39
CTU2-202ENST00000453996 SOWAHBA6NEL2 793 aa23.7■■□□□ 1.39
CTU2-202ENST00000453996 SPATA31C2B4DYI2 1134 aa23.7■■□□□ 1.39
CTU2-202ENST00000453996 BTBD19C9JJ37 291 aa23.7■■□□□ 1.39
CTU2-202ENST00000453996 TBCAO75347 108 aaKnown RBP23.7■■□□□ 1.39
CTU2-202ENST00000453996 CCNE2O96020 404 aa23.7■■□□□ 1.39
CTU2-202ENST00000453996 GSDMDP57764 484 aa23.7■■□□□ 1.39
CTU2-202ENST00000453996 TCP11X2Q5H9J9 407 aa23.7■■□□□ 1.39
CTU2-202ENST00000453996 ANKRD23Q86SG2 305 aa23.7■■□□□ 1.39
CTU2-202ENST00000453996 SHCBP1Q8NEM2 672 aa23.7■■□□□ 1.39
CTU2-202ENST00000453996 BRI3BPQ8WY22 251 aa23.7■■□□□ 1.39
CTU2-202ENST00000453996 SEMA6BQ9H3T3 888 aa23.7■■□□□ 1.39
CTU2-202ENST00000453996 ZBTB39O15060 712 aa23.7■■□□□ 1.38
CTU2-202ENST00000453996 EDNRBP24530 442 aa23.7■■□□□ 1.38
CTU2-202ENST00000453996 KCTD2Q14681 263 aa23.7■■□□□ 1.38
CTU2-202ENST00000453996 FILIP1LQ4L180 1135 aa23.7■■□□□ 1.38
CTU2-202ENST00000453996 CHADLQ6NUI6 762 aa23.7■■□□□ 1.38
CTU2-202ENST00000453996 C1orf186Q6ZWK4 172 aa23.7■■□□□ 1.38
CTU2-202ENST00000453996 GLIS3Q8NEA6 775 aa23.7■■□□□ 1.38
CTU2-202ENST00000453996 MMP19Q99542 508 aa23.7■■□□□ 1.38
CTU2-202ENST00000453996 SRRTQ9BXP5 876 aaKnown RBP23.7■■□□□ 1.38
CTU2-202ENST00000453996 TBC1D7Q9P0N9 293 aa23.7■■□□□ 1.38
CTU2-202ENST00000453996 B4DLN1 442 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 KIF20AO95235 890 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 LYPLA2O95372 231 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 ICAM3P32942 547 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 LRRC63Q05C16 580 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 NR1I3Q14994 352 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 KRT31Q15323 416 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 LRRC41Q15345 812 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 CST9Q5W186 159 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 SMAP1Q8IYB5 467 aaPredicted RBP23.69■■□□□ 1.38
CTU2-202ENST00000453996 MPHOSPH6Q99547 160 aaKnown RBP23.69■■□□□ 1.38
CTU2-202ENST00000453996 R3HDMLQ9H3Y0 253 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 COL4A3BPQ9Y5P4 624 aa23.69■■□□□ 1.38
CTU2-202ENST00000453996 ARHGEF35A5YM69 484 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 ITGBL1O95965 494 aaPredicted RBP23.68■■□□□ 1.38
CTU2-202ENST00000453996 GAP43P17677 238 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 EEF1GP26641 437 aaKnown RBP23.68■■□□□ 1.38
CTU2-202ENST00000453996 FOXR2Q6PJQ5 311 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 SFR1Q86XK3 245 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 IRF2BP1Q8IU81 584 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 JPH1Q9HDC5 661 aaPredicted RBP23.68■■□□□ 1.38
CTU2-202ENST00000453996 MAGEC2Q9UBF1 373 aaPredicted RBP23.68■■□□□ 1.38
CTU2-202ENST00000453996 DBR1Q9UK59 544 aaKnown RBP23.68■■□□□ 1.38
CTU2-202ENST00000453996 ZNFX1Q9P2E3 1918 aaKnown RBP23.68■■□□□ 1.38
CTU2-202ENST00000453996 PSMC5P62195 406 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 FSTL1Q12841 308 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 WDR78Q5VTH9 848 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 FAM114A1Q8IWE2 563 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 TSG101Q99816 390 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 PCDHA10Q9Y5I2 948 aa23.68■■□□□ 1.38
CTU2-202ENST00000453996 LRRC10BA6NIK2 292 aa23.67■■□□□ 1.38
CTU2-202ENST00000453996 RSPH10B2B2RC85 870 aa23.67■■□□□ 1.38
CTU2-202ENST00000453996 RSPH10BP0C881 870 aa23.67■■□□□ 1.38
CTU2-202ENST00000453996 CCNA1P78396 465 aa23.67■■□□□ 1.38
CTU2-202ENST00000453996 UGCGQ16739 394 aa23.67■■□□□ 1.38
CTU2-202ENST00000453996 C4orf19Q8IY42 314 aa23.67■■□□□ 1.38
CTU2-202ENST00000453996 GPRC5AQ8NFJ5 357 aa23.67■■□□□ 1.38
CTU2-202ENST00000453996 FGFBP2Q9BYJ0 223 aa23.67■■□□□ 1.38
CTU2-202ENST00000453996 RRAGDQ9NQL2 400 aaPredicted RBP23.67■■□□□ 1.38
CTU2-202ENST00000453996 SLC9A2Q9UBY0 812 aa23.67■■□□□ 1.38
CTU2-202ENST00000453996 PLXNB2O15031 1838 aa23.67■■□□□ 1.38
CTU2-202ENST00000453996 MYH11P35749 1972 aa23.66■■□□□ 1.38
CTU2-202ENST00000453996 DNAJC25-GNG10A0A024R161 153 aa23.66■■□□□ 1.38
CTU2-202ENST00000453996 FAM13AO94988 1023 aa23.66■■□□□ 1.38
CTU2-202ENST00000453996 PGK2P07205 417 aa23.66■■□□□ 1.38
CTU2-202ENST00000453996 COPB1P53618 953 aaKnown RBP23.66■■□□□ 1.38
CTU2-202ENST00000453996 LRRC8AQ8IWT6 810 aa23.66■■□□□ 1.38
CTU2-202ENST00000453996 CCDC150Q8NCX0 1101 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms