RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 KLHL11Q9NVR0 708 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 LIMA1Q9UHB6 759 aaKnown RBP8.39□□□□□ -1.07
RIF1-206ENST00000453091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.39□□□□□ -1.07
RIF1-206ENST00000453091 A0A0G2JND7 137 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 A6NNZ2 444 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 FGFR4P22455 802 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 PLA2G4AP47712 749 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 SEC24CP53992 1094 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 COG7P83436 770 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 TUBB8Q3ZCM7 444 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 MDH1BQ5I0G3 518 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 MMS22LQ6ZRQ5 1243 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 PDCD7Q8N8D1 485 aaKnown RBP8.39□□□□□ -1.07
RIF1-206ENST00000453091 TC2NQ8N9U0 490 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 NEK9Q8TD19 979 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 FBXL5Q9UKA1 691 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 CFLARO15519 480 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 TOM1L1O75674 476 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 GPSM2P81274 684 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 PRAMEF18Q5VWM3 479 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 ANKRD35Q8N283 1001 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 PRPF38AQ8NAV1 312 aaKnown RBP8.39□□□□□ -1.07
RIF1-206ENST00000453091 HVCN1Q96D96 273 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 SEPT9Q9UHD8 586 aaPredicted RBP8.39□□□□□ -1.07
RIF1-206ENST00000453091 hCG_2014768A0A024R1R8 64 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 IL1RL1Q01638 556 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 MTM1Q13496 603 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 KIRREL3Q8IZU9 778 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 GRK7Q8WTQ7 553 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 IFT122Q9HBG6 1241 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.39□□□□□ -1.07
RIF1-206ENST00000453091 PHF20L1A8MW92 1017 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 CASQ2O14958 399 aaPredicted RBP8.39□□□□□ -1.07
RIF1-206ENST00000453091 CCT6BQ92526 530 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 XDHP47989 1333 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 IL9RQ01113 521 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 AOC3Q16853 763 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 SRLQ86TD4 932 aa8.39□□□□□ -1.07
RIF1-206ENST00000453091 PALLDQ8WX93 1383 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 GSG1L2A8MUP6 293 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 H3BQF6 201 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 TRIM49P0CI25 452 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 TRIM49CP0CI26 452 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 MFAP3P55082 362 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 EXOSC10Q01780 885 aaKnown RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 MTERF2Q49AM1 385 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 CPSF1Q10570 1443 aaKnown RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 HNRNPDLO14979 420 aaKnown RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 CDC37Q16543 378 aaPredicted RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 LMBRD2Q68DH5 695 aaPredicted RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 C1orf54Q8WWF1 131 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 MAML1Q92585 1016 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 NT5C1BQ96P26 610 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 RAVER2Q9HCJ3 691 aaKnown RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 SAYSD1Q9NPB0 183 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 ADGRL3Q9HAR2 1447 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 COASYQ13057 564 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 TAF12Q16514 161 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 SLFN12Q8IYM2 578 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 ARHGEF1Q92888 912 aaKnown RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 NXF1Q9UBU9 619 aaKnown RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 MINPP1Q9UNW1 487 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 LRRD1A4D1F6 860 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 GCLMP48507 274 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 ITKQ08881 620 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 EZH2Q15910 746 aaKnown RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 TMEM47Q9BQJ4 181 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 MED10Q9BTT4 135 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 AMACRQ9UHK6 382 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 IVNS1ABPQ9Y6Y0 642 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 EFCAB6Q5THR3 1501 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 ZBTB7AO95365 584 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 KLRK1P26718 216 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 FKBP3Q00688 224 aaKnown RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 GPR162Q16538 588 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 CDO1Q16878 200 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 GLYCTKQ8IVS8 523 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 RNF25Q96BH1 459 aaPredicted RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 BZW2Q9Y6E2 419 aaKnown RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 ATP7BP35670 1465 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 PPFIA2O75334 1257 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 CYP19A1P11511 503 aaPredicted RBP8.38□□□□□ -1.07
RIF1-206ENST00000453091 LMNB1P20700 586 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 LIFRP42702 1097 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 P3H4Q92791 437 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 TTC17Q96AE7 1141 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 DCTN4Q9UJW0 460 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 ARAP3Q8WWN8 1544 aa8.38□□□□□ -1.07
RIF1-206ENST00000453091 SLC4A1P02730 911 aa8.37□□□□□ -1.07
RIF1-206ENST00000453091 TAL1P17542 331 aaPredicted RBP8.37□□□□□ -1.07
RIF1-206ENST00000453091 GABPAQ06546 454 aa8.37□□□□□ -1.07
RIF1-206ENST00000453091 AP1ARQ63HQ0 302 aa8.37□□□□□ -1.07
RIF1-206ENST00000453091 SRBD1Q8N5C6 995 aaKnown RBP8.37□□□□□ -1.07
RIF1-206ENST00000453091 HSPH1Q92598 858 aa8.37□□□□□ -1.07
RIF1-206ENST00000453091 DYDC2Q96IM9 177 aa8.37□□□□□ -1.07
RIF1-206ENST00000453091 METTL14Q9HCE5 456 aaKnown RBP8.37□□□□□ -1.07
RIF1-206ENST00000453091 POTEFA5A3E0 1075 aa8.37□□□□□ -1.07
RIF1-206ENST00000453091 MMP10P09238 476 aa8.37□□□□□ -1.07
RIF1-206ENST00000453091 POTEIP0CG38 1075 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms