RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 MUC6Q6W4X9 2439 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 MAFGO15525 162 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 MBTPS2O43462 519 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 DDAH1O94760 285 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 MMP1P03956 469 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 ITGB5P18084 799 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 CHMLP26374 656 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 PDE4AP27815 886 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 SP4Q02446 784 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 ADAM15Q13444 863 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 BTG3Q14201 252 aaPredicted RBP13.41□□□□□ -0.26
HERC3-207ENST00000452979 GRIK4Q16099 956 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 NAALADL2Q58DX5 795 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 TTC22Q5TAA0 569 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 TSHZ1Q6ZSZ6 1077 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 RTN4RL1Q86UN2 441 aaPredicted RBP13.41□□□□□ -0.26
HERC3-207ENST00000452979 MB21D2Q8IYB1 491 aaPredicted RBP13.41□□□□□ -0.26
HERC3-207ENST00000452979 DNAJB3Q8WWF6 145 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 UIMC1Q96RL1 719 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 POP1Q99575 1024 aaKnown RBP13.41□□□□□ -0.26
HERC3-207ENST00000452979 MTA3Q9BTC8 594 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 SMARCAD1Q9H4L7 1026 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 TUBE1Q9UJT0 475 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 PLAGL2Q9UPG8 496 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 LOXHD1Q8IVV2 1947 aa13.41□□□□□ -0.26
HERC3-207ENST00000452979 RRN3P2A6NIE6 340 aa13.4□□□□□ -0.26
HERC3-207ENST00000452979 KIF5BP33176 963 aa13.4□□□□□ -0.26
HERC3-207ENST00000452979 MRPS6P82932 125 aaKnown RBP13.4□□□□□ -0.26
HERC3-207ENST00000452979 SMAD4Q13485 552 aaKnown RBP13.4□□□□□ -0.26
HERC3-207ENST00000452979 HERC4Q5GLZ8 1057 aaPredicted RBP13.4□□□□□ -0.26
HERC3-207ENST00000452979 CMTR2Q8IYT2 770 aaKnown RBP13.4□□□□□ -0.26
HERC3-207ENST00000452979 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
HERC3-207ENST00000452979 CTCFLQ8NI51 663 aaPredicted RBP13.4□□□□□ -0.26
HERC3-207ENST00000452979 MAP4K1Q92918 833 aa13.4□□□□□ -0.26
HERC3-207ENST00000452979 FTHL17Q9BXU8 183 aa13.4□□□□□ -0.26
HERC3-207ENST00000452979 PSTPIP2Q9H939 334 aa13.4□□□□□ -0.26
HERC3-207ENST00000452979 AGO3Q9H9G7 860 aaKnown RBP13.4□□□□□ -0.26
HERC3-207ENST00000452979 LY9Q9HBG7 655 aa13.4□□□□□ -0.26
HERC3-207ENST00000452979 UBIAD1Q9Y5Z9 338 aa13.4□□□□□ -0.26
HERC3-207ENST00000452979 CDY2AQ9Y6F7 541 aa13.4□□□□□ -0.26
HERC3-207ENST00000452979 MYO7AQ13402 2215 aa13.4□□□□□ -0.26
HERC3-207ENST00000452979 TBX10O75333 385 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 EYA4O95677 639 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 DNAJB1P25685 340 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 GTF2F1P35269 517 aaKnown RBP eCLIP13.39□□□□□ -0.27
HERC3-207ENST00000452979 GNAQP50148 359 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 NHLH1Q02575 133 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 IER5Q5VY09 327 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 FAM43BQ6ZT52 329 aaPredicted RBP13.39□□□□□ -0.27
HERC3-207ENST00000452979 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 SRBD1Q8N5C6 995 aaKnown RBP13.39□□□□□ -0.27
HERC3-207ENST00000452979 LINC01599Q8WXQ3 324 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 GLG1Q92896 1179 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 MSLNLQ96KJ4 702 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 FBXL18Q96ME1 805 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 ALG13Q9NP73 1137 aaKnown RBP13.39□□□□□ -0.27
HERC3-207ENST00000452979 JADE2Q9NQC1 790 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 SEC63Q9UGP8 760 aaKnown RBP13.39□□□□□ -0.27
HERC3-207ENST00000452979 CD207Q9UJ71 328 aa13.39□□□□□ -0.27
HERC3-207ENST00000452979 MRPL42Q9Y6G3 142 aaKnown RBP13.39□□□□□ -0.27
HERC3-207ENST00000452979 WDFY4Q6ZS81 3184 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 LINC01565O15544 149 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 SGSM2O43147 1006 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 INSRRP14616 1297 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 MARK3P27448 753 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 MRE11P49959 708 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 MTMR1Q13613 665 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 CLUL1Q15846 466 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 HFE2Q6ZVN8 426 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 BMP8AQ7Z5Y6 402 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 RNF135Q8IUD6 432 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 SPPL3Q8TCT6 385 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 EDAQ92838 391 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 TNPO1Q92973 898 aaKnown RBP13.38□□□□□ -0.27
HERC3-207ENST00000452979 MFSD14AQ96MC6 490 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 PCYT2Q99447 389 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 IGFLR1Q9H665 355 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 PCDHA2Q9Y5H9 948 aa13.38□□□□□ -0.27
HERC3-207ENST00000452979 TRIOO75962 3097 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 STXBP3O00186 592 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 PLEKHA8P1O95397 391 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 ITGB1P05556 798 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 CD52P31358 61 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 COASYQ13057 564 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 PLPPR4Q7Z2D5 763 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 NPAS4Q8IUM7 802 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 NME8Q8N427 588 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 EFHBQ8N7U6 833 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 MYL10Q9BUA6 226 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 CLEC1BQ9P126 229 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 MUTYHQ9UIF7 546 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 PADI3Q9ULW8 664 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 PCDHA6Q9UN73 950 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 PCDHA8Q9Y5H6 950 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 PLXNA4Q9HCM2 1894 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 ZNF318Q5VUA4 2279 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 PIEZO1Q92508 2521 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 IGSF9BQ9UPX0 1349 aa13.37□□□□□ -0.27
HERC3-207ENST00000452979 KDM3AQ9Y4C1 1321 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms