RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 POTEEQ6S8J3 1075 aa13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 DDX47Q9H0S4 455 aaKnown RBP13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 NFS1Q9Y697 457 aa13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 GOLGB1Q14789 3259 aaKnown RBP13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 MEIS1O00470 390 aa13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 UFL1O94874 794 aa13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 RFC4P35249 363 aa13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 MARSP56192 900 aaKnown RBP13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 RPS6KA1Q15418 735 aa13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 LRRC57Q8N9N7 239 aa13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 NUCKS1Q9H1E3 243 aaKnown RBP13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 DDX4Q9NQI0 724 aaKnown RBP13.79□□□□□ -0.2
THUMPD3-206ENST00000452837 NR2F2P24468 414 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 MDH1P40925 334 aaKnown RBP13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 ZNF543Q08ER8 600 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 SHROOM1Q2M3G4 852 aaPredicted RBP13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 METTL13Q8N6R0 699 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 MYCBPAPQ8TBZ2 947 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 SCFD2Q8WU76 684 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 CCT8L2Q96SF2 557 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 P2RX7Q99572 595 aaKnown RBP13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 TAF1DQ9H5J8 278 aaPredicted RBP13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 TMBIM4Q9HC24 238 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 HDAC9Q9UKV0 1011 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 PNMA6FA0A0J9YX94 578 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 ASPRV1Q53RT3 343 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 HYIQ5T013 277 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 FOXR2Q6PJQ5 311 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 NLRP14Q86W24 1093 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 SUGP1Q8IWZ8 645 aaKnown RBP13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 WHAMMQ8TF30 809 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 ISCUQ9H1K1 167 aa13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 PPANQ9NQ55 473 aaKnown RBP13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 RTCBQ9Y3I0 505 aaKnown RBP13.78□□□□□ -0.2
THUMPD3-206ENST00000452837 IGKV6D-41A0A0C4DH26 115 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 DCDC2CA8MYV0 355 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 F8W031 263 aaPredicted RBP13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 MEFVO15553 781 aaPredicted RBP13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 UCHL3P15374 230 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 TAL1P17542 331 aaPredicted RBP13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 TMOD1P28289 359 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 USP11P51784 963 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 SLC12A3P55017 1021 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 GABPAQ06546 454 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 SPRED3Q2MJR0 410 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 EMC10Q5UCC4 262 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 CCDC65Q8IXS2 484 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 ZC3H3Q8IXZ2 948 aaKnown RBP13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 LRRC27Q9C0I9 530 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 NAGPAQ9UK23 515 aa13.77□□□□□ -0.2
THUMPD3-206ENST00000452837 SART1O43290 800 aaKnown RBP13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 PON1P27169 355 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 POLD1P28340 1107 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 EPS15P42566 896 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 CASP4P49662 377 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 KCNA1Q09470 495 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 ARHGAP27Q6ZUM4 889 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 CELF4Q9BZC1 486 aaKnown RBP13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 CNOT8Q9UFF9 292 aaKnown RBP13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 NR2E1Q9Y466 385 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 DAGLAQ9Y4D2 1042 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 RSPH10B2B2RC85 870 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 AKAP3O75969 853 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 RSPH10BP0C881 870 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 TNNC1P63316 161 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 ZNF844Q08AG5 666 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 OTUD6BQ8N6M0 293 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 TAF4BQ92750 862 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 PSTPIP2Q9H939 334 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 BMP2KQ9NSY1 1161 aaPredicted RBP13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 AMACRQ9UHK6 382 aa13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.21
THUMPD3-206ENST00000452837 MYH7BA7E2Y1 1941 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 COL24A1Q17RW2 1714 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 E7EVH7 732 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 hCG_1984214I3L0E3 225 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 ALKBH5Q6P6C2 394 aaKnown RBP13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 PAXIP1Q6ZW49 1069 aaPredicted RBP13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 CNPY4Q8N129 248 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 ZNF713Q8N859 430 aaPredicted RBP13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 TPCN2Q8NHX9 752 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 CUL5Q93034 780 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 LUC7LQ9NQ29 371 aaKnown RBP13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 PLCB1Q9NQ66 1216 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 DAPK3O43293 454 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 GNA14O95837 355 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 KRT18P05783 430 aaKnown RBP13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 SNAP25P60880 206 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 IFT88Q13099 833 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 PABPC4Q13310 644 aaKnown RBP eCLIP13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 SEPT2Q15019 361 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 QPCTQ16769 361 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 DCAF17Q5H9S7 520 aaPredicted RBP13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 B4GALNT4Q76KP1 1039 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 SFR1Q86XK3 245 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 PRPF38AQ8NAV1 312 aaKnown RBP13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 SPAG5Q96R06 1193 aa13.76□□□□□ -0.21
THUMPD3-206ENST00000452837 MXD3Q9BW11 206 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms