RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 ERMNQ8TAM6 284 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 KCNV2Q8TDN2 545 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 LRRC8CQ8TDW0 803 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 SYN2Q92777 582 aaPredicted RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 MS4A3Q96HJ5 214 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TCHPQ9BT92 498 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 YIPF2Q9BWQ6 316 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 ETNK1Q9HBU6 452 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TMEM165Q9HC07 324 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 CTDP1Q9Y5B0 961 aaPredicted RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 SOS2Q07890 1332 aaPredicted RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 CCDC162PA2VCL2 907 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 GOLGA8AA7E2F4 631 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 RBAK-RBAKDNI3L0D1 243 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 WASLO00401 505 aaPredicted RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TRAFD1O14545 582 aaPredicted RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 ZNF213O14771 459 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TPD52L2O43399 206 aaKnown RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 ATP9BO43861 1147 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 PEX11AO75192 247 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 ASLP04424 464 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 CYP27A1Q02318 531 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 CTDSPL2Q05D32 466 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 DHX9Q08211 1270 aaKnown RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 SLC44A4Q53GD3 710 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 DAB2IPQ5VWQ8 1189 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 PHLDB3Q6NSJ2 640 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 SPNS2Q8IVW8 549 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 GRAMD1CQ8IYS0 662 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 ST13P4Q8IZP2 240 aaPredicted RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 ADSSL1Q8N142 457 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TMTC2Q8N394 836 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 SLC35B4Q969S0 331 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 SELENOSQ9BQE4 189 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TUBGCP2Q9BSJ2 902 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 PPP1R12CQ9BZL4 782 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 EPB41L1Q9H4G0 881 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 METTL14Q9HCE5 456 aaKnown RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TIMMDC1Q9NPL8 285 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 USP40Q9NVE5 1235 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 PAG1Q9NWQ8 432 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 DDX43Q9NXZ2 648 aaKnown RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TLR7Q9NYK1 1049 aaKnown RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TMOD4Q9NZQ9 345 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 PRKAG3Q9UGI9 489 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 PARP2Q9UGN5 583 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 DIS3Q9Y2L1 958 aaKnown RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 ESYT3A0FGR9 886 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 MAPK13O15264 365 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 ZBTB43O43298 467 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 MAP3K7O43318 606 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 RANBP6O60518 1105 aaKnown RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 DCTN3O75935 186 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 IFNAR1P17181 557 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 CXCR5P32302 372 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 SERPINB4P48594 390 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 DRG2P55039 364 aaKnown RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 RNASELQ05823 741 aaKnown RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 PRPF4BQ13523 1007 aaKnown RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 CYLC2Q14093 348 aaPredicted RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 RCN2Q14257 317 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 PPP2R5BQ15173 497 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 RPS6KA1Q15418 735 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 NAB2Q15742 525 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 LIN52Q52LA3 116 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 HSP90AA5PQ58FG0 334 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 DENND2CQ68D51 928 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 NCCRP1Q6ZVX7 275 aaPredicted RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 INTS8Q75QN2 995 aaKnown RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 PASD1Q8IV76 773 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 ZSCAN29Q8IWY8 852 aaPredicted RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 STAG2Q8N3U4 1231 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 SNRNP27Q8WVK2 155 aaKnown RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 CLMNQ96JQ2 1002 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 FAM81BQ96LP2 452 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 PRMT1Q99873 361 aaKnown RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 ZCWPW1Q9H0M4 648 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 PABPC3Q9H361 631 aaKnown RBP9.09□□□□□ -0.95
SMCO1-202ENST00000452776 MLXIPQ9HAP2 919 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 ARHGEF10LQ9HCE6 1279 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 ZNF212Q9UDV6 495 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 INTUQ9ULD6 942 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 ABCB11O95342 1321 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 NFAT5O94916 1531 aa9.09□□□□□ -0.95
SMCO1-202ENST00000452776 ATP9AO75110 1047 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 RAPGEF3O95398 923 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 RPN1P04843 607 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 HNRNPCP07910 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 ECHS1P30084 290 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 EIF4A3P38919 411 aaKnown RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 RGS2P41220 211 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 TUBP50607 506 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 TOB1P50616 345 aaPredicted RBP9.08□□□□□ -0.96
SMCO1-202ENST00000452776 RCAN1P53805 252 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 PDE1BQ01064 536 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 AP1B1Q10567 949 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 CNGA2Q16280 664 aa9.08□□□□□ -0.96
SMCO1-202ENST00000452776 CROCCP3Q8IVE0 287 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms