RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 CD2BP2O95400 341 aaKnown RBP18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 STAT5BP51692 787 aa18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 MKRN4PQ13434 485 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 PLCB4Q15147 1175 aa18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 NONOQ15233 471 aaKnown RBP eCLIP18.28■□□□□ 0.522e-6■■■□□ 18.6
SCAMP4-205ENST00000452128 INF2Q27J81 1249 aa18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 FAM26DQ5JW98 314 aa18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 LRRC8DQ7L1W4 858 aa18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 OSBPL7Q9BZF2 842 aa18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 NOD1Q9Y239 953 aa18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 MAFBQ9Y5Q3 323 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-205ENST00000452128 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 FAM205CA6NFA0 338 aa18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 INSRRP14616 1297 aa18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 NR5A1Q13285 461 aa18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 PPP4R3AQ6IN85 833 aa18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 CCDC60Q8IWA6 550 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 CCDC83Q8IWF9 413 aa18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 GLG1Q92896 1179 aa18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 GJA10Q969M2 543 aa18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 BACH2Q9BYV9 841 aa18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 SH2B1Q9NRF2 756 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-205ENST00000452128 ZBTB42B2RXF5 422 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 DDX39AO00148 427 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 SLC37A4O43826 429 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 CAND2O75155 1236 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 PARNO95453 639 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 MMP1P03956 469 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 GNAT1P11488 350 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 XBP1P17861 261 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 MARK3P27448 753 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 SLC26A2P50443 739 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 GRIK4Q16099 956 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 KRT40Q6A162 431 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 RUFY4Q6ZNE9 571 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 OTOP2Q7RTS6 562 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 CCDC155Q8N6L0 562 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 KCNMB3Q9NPA1 279 aa18.26■□□□□ 0.51
SCAMP4-205ENST00000452128 GRXCR1A8MXD5 290 aa18.25■□□□□ 0.51
SCAMP4-205ENST00000452128 BTBD18B2RXH4 712 aa18.25■□□□□ 0.51
SCAMP4-205ENST00000452128 KRT76Q01546 638 aa18.25■□□□□ 0.51
SCAMP4-205ENST00000452128 PPFIA1Q13136 1202 aa18.25■□□□□ 0.51
SCAMP4-205ENST00000452128 SWSAP1Q6NVH7 229 aa18.25■□□□□ 0.51
SCAMP4-205ENST00000452128 DEFB128Q7Z7B8 93 aa18.25■□□□□ 0.51
SCAMP4-205ENST00000452128 SMAP1Q8IYB5 467 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-205ENST00000452128 MTMR10Q9NXD2 777 aa18.25■□□□□ 0.51
SCAMP4-205ENST00000452128 PCDHA10Q9Y5I2 948 aa18.25■□□□□ 0.51
SCAMP4-205ENST00000452128 SCN5AQ14524 2016 aa18.25■□□□□ 0.51
SCAMP4-205ENST00000452128 RRN3P2A6NIE6 340 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 WNT7AO00755 349 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 ZNF862O60290 1169 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 STBD1O95210 358 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 CHRNA1P02708 482 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 MGAT3Q09327 533 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 MIS18BP1Q6P0N0 1132 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 PIK3AP1Q6ZUJ8 805 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 Q7L0L9 218 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 NEK8Q86SG6 692 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 ATP8B4Q8TF62 1192 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 HAS1Q92839 578 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 ZBTB10Q96DT7 871 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 TTYH1Q9H313 450 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 UNC45AQ9H3U1 944 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 AZI2Q9H6S1 392 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 CDH23Q9H251 3354 aa18.24■□□□□ 0.51
SCAMP4-205ENST00000452128 CCDC194A0A1B0GVG4 234 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 POTEB3A0JP26 581 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 RSPH10B2B2RC85 870 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 RSPH10BP0C881 870 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 KRT2P35908 639 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 THPOP40225 353 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 TAF2Q6P1X5 1199 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 POTEBQ6S5H4 581 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 ZNF302Q9NR11 478 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 DDX25Q9UHL0 483 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 PCDHA2Q9Y5H9 948 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 GTF3C3Q9Y5Q9 886 aa18.23■□□□□ 0.51
SCAMP4-205ENST00000452128 CHD7Q9P2D1 2997 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 HBP1O60381 514 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 GCFC2P16383 781 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 PBX2P40425 430 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 LETM2Q2VYF4 491 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 PLEKHG4Q58EX7 1191 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 LRCH2Q5VUJ6 765 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 DIS3L2Q8IYB7 885 aaKnown RBP18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 DEFB123Q8N688 67 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 FBXO18Q8NFZ0 1043 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 RDM1Q8NG50 284 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 TRAPPC12Q8WVT3 735 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 TMX3Q96JJ7 454 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 FAM20AQ96MK3 541 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 PBX4Q9BYU1 374 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 SEMA6BQ9H3T3 888 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 DISC1Q9NRI5 854 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 TUBE1Q9UJT0 475 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 VAV3Q9UKW4 847 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 COL6A3P12111 3177 aa18.22■□□□□ 0.51
SCAMP4-205ENST00000452128 IGSF9BQ9UPX0 1349 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms