RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 NPHP3-ACAD11A0A0J9YXS1 232 aa24.06■■□□□ 1.44
NPAS1-202ENST00000449844 KRT86O43790 486 aa24.06■■□□□ 1.44
NPAS1-202ENST00000449844 CCDC40Q4G0X9 1142 aa24.06■■□□□ 1.44
NPAS1-202ENST00000449844 CTDP1Q9Y5B0 961 aaPredicted RBP24.06■■□□□ 1.44
NPAS1-202ENST00000449844 CCDC122Q5T0U0 273 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 C9orf131Q5VYM1 1079 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 TMCO3Q6UWJ1 677 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 CPXCR1Q8N123 301 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 SCFD1Q8WVM8 642 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 JAKMIP2Q96AA8 810 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 FGFBP2Q9BYJ0 223 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 KCTD10Q9H3F6 313 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 MMRN2Q9H8L6 949 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 SLC38A10Q9HBR0 1119 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 TBC1D7Q9P0N9 293 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 ZHX2Q9Y6X8 837 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 EDRF1Q3B7T1 1238 aa24.05■■□□□ 1.44
NPAS1-202ENST00000449844 IGLV3-22A0A075B6J6 115 aa24.04■■□□□ 1.44
NPAS1-202ENST00000449844 AMPD2Q01433 879 aa24.04■■□□□ 1.44
NPAS1-202ENST00000449844 GIT2Q14161 759 aa24.04■■□□□ 1.44
NPAS1-202ENST00000449844 NOL9Q5SY16 702 aaKnown RBP24.04■■□□□ 1.44
NPAS1-202ENST00000449844 KRT222Q8N1A0 295 aa24.04■■□□□ 1.44
NPAS1-202ENST00000449844 NEK11Q8NG66 645 aa24.04■■□□□ 1.44
NPAS1-202ENST00000449844 CCDC42Q96M95 316 aa24.04■■□□□ 1.44
NPAS1-202ENST00000449844 RAVER2Q9HCJ3 691 aaKnown RBP24.04■■□□□ 1.44
NPAS1-202ENST00000449844 FAM207AQ9NSI2 230 aaPredicted RBP24.04■■□□□ 1.44
NPAS1-202ENST00000449844 PRKG1Q13976 671 aa24.03■■□□□ 1.44
NPAS1-202ENST00000449844 NELFCDQ8IXH7 590 aa24.03■■□□□ 1.44
NPAS1-202ENST00000449844 UBE2Q2Q8WVN8 375 aa24.03■■□□□ 1.44
NPAS1-202ENST00000449844 DCPSQ96C86 337 aaKnown RBP24.03■■□□□ 1.44
NPAS1-202ENST00000449844 TSGA10Q9BZW7 698 aa24.03■■□□□ 1.44
NPAS1-202ENST00000449844 TRIM10Q9UDY6 481 aa24.03■■□□□ 1.44
NPAS1-202ENST00000449844 ZBED4O75132 1171 aa24.03■■□□□ 1.44
NPAS1-202ENST00000449844 ZRANB2O95218 330 aaKnown RBP eCLIP24.03■■□□□ 1.44
NPAS1-202ENST00000449844 ALAS1P13196 640 aa24.03■■□□□ 1.44
NPAS1-202ENST00000449844 PSMC6P62333 389 aa24.03■■□□□ 1.44
NPAS1-202ENST00000449844 CACNB1Q02641 598 aaPredicted RBP24.03■■□□□ 1.44
NPAS1-202ENST00000449844 PABPC4Q13310 644 aaKnown RBP eCLIP24.03■■□□□ 1.44
NPAS1-202ENST00000449844 UTRNP46939 3433 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 C19orf81C9J6K1 198 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 POTEB2H3BUK9 544 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 EPHB6O15197 1021 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 ATP8B1O43520 1251 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 HSD17B4P51659 736 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 VAV2P52735 878 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 HMGCS2P54868 508 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 SPA17Q15506 151 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 MCF2L2Q86YR7 1114 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 CYP2W1Q8TAV3 490 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 C12orf42Q96LP6 360 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 EIF2AK1Q9BQI3 630 aaKnown RBP24.02■■□□□ 1.44
NPAS1-202ENST00000449844 FAM184BQ9ULE4 1060 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 MYO6Q9UM54 1294 aa24.02■■□□□ 1.44
NPAS1-202ENST00000449844 NFIBO00712 420 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 EYA4O95677 639 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 FDX1P10109 184 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 UBXN2AP68543 259 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 TRIM59Q8IWR1 403 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 SULF1Q8IWU6 871 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.01■■□□□ 1.43
NPAS1-202ENST00000449844 CLEC4DQ8WXI8 215 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 BAP1Q92560 729 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 NUCKS1Q9H1E3 243 aaKnown RBP24.01■■□□□ 1.43
NPAS1-202ENST00000449844 PNMA2Q9UL42 364 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 MEIS1O00470 390 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 RAD51AP2Q09MP3 1159 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 PDXDC1Q6P996 788 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 PURBQ96QR8 312 aaKnown RBP24.01■■□□□ 1.43
NPAS1-202ENST00000449844 REEP2Q9BRK0 252 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 PARD6BQ9BYG5 372 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 ZHX3Q9H4I2 956 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 TUFT1Q9NNX1 390 aa24.01■■□□□ 1.43
NPAS1-202ENST00000449844 PUF60Q9UHX1 559 aaKnown RBP24.01■■□□□ 1.43
NPAS1-202ENST00000449844 COL11A1P12107 1806 aaPredicted RBP24■■□□□ 1.43
NPAS1-202ENST00000449844 CETN3O15182 167 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 LCA5LO95447 670 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 KCNMA1Q12791 1236 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 EPM2AIP1Q7L775 607 aaPredicted RBP24■■□□□ 1.43
NPAS1-202ENST00000449844 HOMER2Q9NSB8 354 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 ARHGAP20Q9P2F6 1191 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 TRAF3IP3Q9Y228 551 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 WDR90Q96KV7 1748 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 RLFQ13129 1914 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 USP2O75604 605 aaPredicted RBP24■■□□□ 1.43
NPAS1-202ENST00000449844 ZSCAN20P17040 1043 aaPredicted RBP24■■□□□ 1.43
NPAS1-202ENST00000449844 ADAM9Q13443 819 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 RRAGAQ7L523 313 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 TRAPPC11Q7Z392 1133 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 ATG4CQ96DT6 458 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 TMOD4Q9NZQ9 345 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 CEP72Q9P209 647 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 RABGAP1Q9Y3P9 1069 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24■■□□□ 1.43
NPAS1-202ENST00000449844 FHOD1Q9Y613 1164 aa24■■□□□ 1.43
NPAS1-202ENST00000449844 OTOFQ9HC10 1997 aa23.99■■□□□ 1.43
NPAS1-202ENST00000449844 CTAGE15A4D2H0 777 aa23.99■■□□□ 1.43
NPAS1-202ENST00000449844 LRRC53A6NM62 1247 aa23.99■■□□□ 1.43
NPAS1-202ENST00000449844 ADM5C9JUS6 153 aa23.99■■□□□ 1.43
NPAS1-202ENST00000449844 EML1O00423 815 aa23.99■■□□□ 1.43
NPAS1-202ENST00000449844 VWA5AO00534 786 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms