RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 TTC8Q8TAM2 541 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 ASIC4Q96FT7 647 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 ZNF594Q96JF6 807 aaPredicted RBP8.9□□□□□ -0.98
LPP-208ENST00000448637 KIAA1024Q9UPX6 916 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 hCG_1642624A0A1W2PR95 340 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 SEMA3EO15041 775 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 PFKFB1P16118 471 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 PTPROQ16827 1216 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 ALS2CLQ60I27 953 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 TMC4Q7Z404 712 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 KSR1Q8IVT5 923 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 TCP11Q8WWU5 503 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 AK8Q96MA6 479 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 FSD1LQ9BXM9 530 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 KIAA1468Q9P260 1216 aa8.9□□□□□ -0.98
LPP-208ENST00000448637 E5RI56 91 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 MAPK13O15264 365 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 VAMP4O75379 141 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 MOCS3O95396 460 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 CDC25BP30305 580 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 HOXC9P31274 260 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 VCPP55072 806 aaKnown RBP8.9□□□□□ -0.99
LPP-208ENST00000448637 RASSF7Q02833 373 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 MORF4L2Q15014 288 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 FANCBQ8NB91 859 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 SH3TC2Q8TF17 1288 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 YY1AP1Q9H869 796 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 ACTR5Q9H9F9 607 aaPredicted RBP8.9□□□□□ -0.99
LPP-208ENST00000448637 CASS4Q9NQ75 786 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.99
LPP-208ENST00000448637 GFAPP14136 432 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 NR2F2P24468 414 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 BBS9Q3SYG4 887 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 KIAA0825Q8IV33 1275 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 PYROXD1Q8WU10 500 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 BTN2A2Q8WVV5 523 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 DHTKD1Q96HY7 919 aaPredicted RBP8.9□□□□□ -0.99
LPP-208ENST00000448637 USP21Q9UK80 565 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 ZFYVE9O95405 1425 aa8.9□□□□□ -0.99
LPP-208ENST00000448637 ARIH2O95376 493 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 PLS3P13797 630 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 PCYT1AP49585 367 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 EIF3BP55884 814 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 TNFAIP2Q03169 654 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 ZKSCAN8Q15776 578 aaPredicted RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 RC3H1Q5TC82 1133 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 NLGN1Q8N2Q7 840 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 LARP4BQ92615 738 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 CNOT6LQ96LI5 555 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 ATP6V0A4Q9HBG4 840 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 SENP1Q9P0U3 644 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 CLCA2Q9UQC9 943 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 ZMYM6O95789 1325 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 PRR23D1E9PI22 279 aaPredicted RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 PRPF4O43172 522 aaKnown RBP eCLIP8.89□□□□□ -0.99
LPP-208ENST00000448637 WBP4O75554 376 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 LDHAP00338 332 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 PRR23D2P0DMB1 279 aaPredicted RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 PLTPP55058 493 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 CYP4A11Q02928 519 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 CUL1Q13616 776 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 CCDC85BQ15834 202 aaPredicted RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 FAM98CQ17RN3 349 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 APPL2Q8NEU8 664 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.89□□□□□ -0.99
LPP-208ENST00000448637 OSBPL10Q9BXB5 764 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 FAM129AQ9BZQ8 928 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 NDEL1Q9GZM8 345 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 TRPV6Q9H1D0 765 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 TMEM63CQ9P1W3 806 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 SEL1LQ9UBV2 794 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 GOLGA8JA6NMD2 632 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 SGSM2O43147 1006 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 CCT5P48643 541 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 COPB1P53618 953 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 HIF1AQ16665 826 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 ICE2Q659A1 982 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 LRRC8BQ6P9F7 803 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 MAML1Q92585 1016 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 EGFL8Q99944 293 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 TSSK1BQ9BXA7 367 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 APOBEC2Q9Y235 224 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 SNAPC4Q5SXM2 1469 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 DCTN3O75935 186 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 KRT38O76015 456 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 FMNL1O95466 1100 aaPredicted RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 IFT88Q13099 833 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 NR5A1Q13285 461 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 NBPF20Q3BBV1 942 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 THEMIS2Q5TEJ8 643 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 NBPF10Q6P3W6 841 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 EYA1Q99502 592 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 DDX50Q9BQ39 737 aaKnown RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 TOPORSQ9NS56 1045 aaPredicted RBP8.89□□□□□ -0.99
LPP-208ENST00000448637 NDE1Q9NXR1 346 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 NFU1Q9UMS0 254 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 SATB2Q9UPW6 733 aa8.89□□□□□ -0.99
LPP-208ENST00000448637 CHUKO15111 745 aa8.88□□□□□ -0.99
LPP-208ENST00000448637 CMA1P23946 247 aa8.88□□□□□ -0.99
LPP-208ENST00000448637 TRAPPC10P48553 1259 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms