RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 SLC9A7Q96T83 725 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 TM9SF2Q99805 663 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 HTATIP2Q9BUP3 242 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 DSCC1Q9BVC3 393 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 SRRTQ9BXP5 876 aaKnown RBP7.5□□□□□ -1.21
USP49-205ENST00000448078 GPR62Q9BZJ7 368 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 RNF114Q9Y508 228 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 PCDHB12Q9Y5F1 795 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 UBN2Q6ZU65 1347 aa7.5□□□□□ -1.21
USP49-205ENST00000448078 MEIS3P2A8K0S8 358 aa7.49□□□□□ -1.21
USP49-205ENST00000448078 H0YGN5 161 aa7.49□□□□□ -1.21
USP49-205ENST00000448078 TP53P04637 393 aaPredicted RBP7.49□□□□□ -1.21
USP49-205ENST00000448078 JUNBP17275 347 aaPredicted RBP7.49□□□□□ -1.21
USP49-205ENST00000448078 EIF2S2P20042 333 aaKnown RBP7.49□□□□□ -1.21
USP49-205ENST00000448078 SUPT20HL1Q3ZLR7 823 aa7.49□□□□□ -1.21
USP49-205ENST00000448078 NBPF12Q5TAG4 269 aaPredicted RBP7.49□□□□□ -1.21
USP49-205ENST00000448078 TDRD10Q5VZ19 366 aaKnown RBP7.49□□□□□ -1.21
USP49-205ENST00000448078 TTC6Q86TZ1 520 aa7.49□□□□□ -1.21
USP49-205ENST00000448078 APOBEC3FQ8IUX4 373 aaKnown RBP7.49□□□□□ -1.21
USP49-205ENST00000448078 TBC1D16Q8TBP0 767 aa7.49□□□□□ -1.21
USP49-205ENST00000448078 DUSP15Q9H1R2 295 aaPredicted RBP7.49□□□□□ -1.21
USP49-205ENST00000448078 POLLQ9UGP5 575 aa7.49□□□□□ -1.21
USP49-205ENST00000448078 SNED1Q8TER0 1413 aa7.49□□□□□ -1.21
USP49-205ENST00000448078 UFL1O94874 794 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 SSBP05455 408 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP49-205ENST00000448078 ZBTB48P10074 688 aaPredicted RBP7.48□□□□□ -1.21
USP49-205ENST00000448078 GUCY2CP25092 1073 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 RPL10P27635 214 aaKnown RBP7.48□□□□□ -1.21
USP49-205ENST00000448078 AFMP43652 599 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 EIF4A1P60842 406 aaKnown RBP7.48□□□□□ -1.21
USP49-205ENST00000448078 GPSM2P81274 684 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 AIMP1Q12904 312 aaKnown RBP7.48□□□□□ -1.21
USP49-205ENST00000448078 DCTN1Q14203 1278 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 SF3B3Q15393 1217 aaKnown RBP7.48□□□□□ -1.21
USP49-205ENST00000448078 KCNMB1Q16558 191 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 NOL9Q5SY16 702 aaKnown RBP7.48□□□□□ -1.21
USP49-205ENST00000448078 RUFY4Q6ZNE9 571 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 NLRP10Q86W26 655 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 WFDC3Q8IUB2 231 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 TMEM192Q8IY95 271 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 ANAPC16Q96DE5 110 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 ZMYM5Q9UJ78 669 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 PCDHA11Q9Y5I1 949 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 MYO3BQ8WXR4 1341 aa7.48□□□□□ -1.21
USP49-205ENST00000448078 UBR2Q8IWV8 1755 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 TNFRSF10CO14798 259 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 MYO1BO43795 1136 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 CAPN2P17655 700 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 HOXD10P28358 340 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 PCBP3P57721 371 aaKnown RBP7.47□□□□□ -1.21
USP49-205ENST00000448078 PRKG1Q13976 671 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 MPZL3Q6UWV2 235 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 MOB2Q70IA6 237 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 COPS6Q7L5N1 327 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 TMC3Q7Z5M5 1100 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 ATG4DQ86TL0 474 aaPredicted RBP7.47□□□□□ -1.21
USP49-205ENST00000448078 LSRQ86X29 649 aaPredicted RBP7.47□□□□□ -1.21
USP49-205ENST00000448078 FAM168AQ92567 244 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 DHX38Q92620 1227 aaKnown RBP7.47□□□□□ -1.21
USP49-205ENST00000448078 COL4A5P29400 1685 aa7.47□□□□□ -1.21
USP49-205ENST00000448078 BCORQ6W2J9 1755 aa7.46□□□□□ -1.21
USP49-205ENST00000448078 SHISA3A0PJX4 238 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 PRMT2P55345 433 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 BBS9Q3SYG4 887 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 CCDC152Q4G0S7 254 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 PRAMEF18Q5VWM3 479 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 CD99L2Q8TCZ2 262 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 CHMP4AQ9BY43 222 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 BABAM1Q9NWV8 329 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 GFOD1Q9NXC2 390 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 SUCOQ9UBS9 1254 aaKnown RBP7.46□□□□□ -1.22
USP49-205ENST00000448078 TSPYL4Q9UJ04 414 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 TMEM59LQ9UK28 342 aa7.46□□□□□ -1.22
USP49-205ENST00000448078 DNAJC25-GNG10A0A024R161 153 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 A0A1W2PPC1 479 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 ESR1P03372 595 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 SYPP08247 313 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 SOX9P48436 509 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 DUSP4Q13115 394 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 SNW1Q13573 536 aaKnown RBP7.45□□□□□ -1.22
USP49-205ENST00000448078 GNPTABQ3T906 1256 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 RALGPS1Q5JS13 557 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 CWF19L1Q69YN2 538 aaKnown RBP7.45□□□□□ -1.22
USP49-205ENST00000448078 UNC5AQ6ZN44 842 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 CBLL1Q75N03 491 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 OR6P1Q8NGX9 317 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 ENOX1Q8TC92 643 aaKnown RBP7.45□□□□□ -1.22
USP49-205ENST00000448078 CELF1Q92879 486 aaKnown RBP7.45□□□□□ -1.22
USP49-205ENST00000448078 KIRREL1Q96J84 757 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 ZNF333Q96JL9 665 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 THUMPD2Q9BTF0 503 aaKnown RBP7.45□□□□□ -1.22
USP49-205ENST00000448078 PRDM14Q9GZV8 571 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 CHST7Q9NS84 486 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 SLC12A7Q9Y666 1083 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 ASTN2O75129 1339 aaPredicted RBP7.45□□□□□ -1.22
USP49-205ENST00000448078 MAPK8IP3Q9UPT6 1336 aa7.45□□□□□ -1.22
USP49-205ENST00000448078 KIAA0100Q14667 2235 aaKnown RBP7.44□□□□□ -1.22
USP49-205ENST00000448078 A0A0C4DFX4 3053 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 IRS4O14654 1257 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms