RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 PBX2P40425 430 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 PRPHP41219 470 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 TECP42680 631 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 NASPP49321 788 aaPredicted RBP8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 PSEN2P49810 448 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 PRSS12P56730 875 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 PPP2R5CQ13362 524 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 PDIA5Q14554 519 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 HSDL1Q3SXM5 330 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 ARL6IP4Q66PJ3 421 aaKnown RBP8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 ZNF746Q6NUN9 644 aaPredicted RBP8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 B3GNT9Q6UX72 402 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 DTHD1Q6ZMT9 781 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 TLK2Q86UE8 772 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 LINC00301Q8NCQ3 95 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 OR6J1Q8NGC5 347 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 PPTC7Q8NI37 304 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 AFG1LQ8WV93 481 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 SEPT1Q8WYJ6 367 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 CHAMP1Q96JM3 812 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 SPATA33Q96N06 139 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 DEFB118Q96PH6 123 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 GPR20Q99678 358 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 TEKT3Q9BXF9 490 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 UPF3AQ9H1J1 476 aaKnown RBP8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 SPC25Q9HBM1 224 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 SLC9A2Q9UBY0 812 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 RCOR1Q9UKL0 485 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 VAV3Q9UKW4 847 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 TELO2Q9Y4R8 837 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 MORC2Q9Y6X9 1032 aaPredicted RBP8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 MCM3APO60318 1980 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 GSTTP1A0A1W2PQM5 241 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 DDX39AO00148 427 aaKnown RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 NOP56O00567 594 aaKnown RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 SPTLC2O15270 562 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 ADAMTS4O75173 837 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 SGPL1O95470 568 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 YEATS4O95619 227 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 TFRCP02786 760 aaKnown RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 C6orf222P0C671 652 aaPredicted RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 MARCKSP29966 332 aaPredicted RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 CPT1AP50416 773 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 ACTR2P61160 394 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 KRT85P78386 507 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 KRT76Q01546 638 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 SP4Q02446 784 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 SPIRE1Q08AE8 756 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 STK38Q15208 465 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 LRRC41Q15345 812 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 FSCN1Q16658 493 aaKnown RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 DGKDQ16760 1214 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 GNASQ5JWF2 1037 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 CCSAPQ6IQ19 270 aaPredicted RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 ABHD15Q6UXT9 468 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 RNF180Q86T96 592 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 SMAP1Q8IYB5 467 aaPredicted RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 KRI1Q8N9T8 703 aaKnown RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 ARRDC4Q8NCT1 418 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 KLHDC9Q8NEP7 349 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 TNPO1Q92973 898 aaKnown RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 FERMT2Q96AC1 680 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 SCAND2PQ9GZW5 306 aaPredicted RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 UNC45AQ9H3U1 944 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 OGDHLQ9ULD0 1010 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 PCDHA10Q9Y5I2 948 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 SRPRBQ9Y5M8 271 aaKnown RBP8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 SYNRGQ9UMZ2 1314 aa8.5□□□□□ -1.05
AC004540.1-206ENST00000448056 IGKV6D-21A0A0A0MT36 114 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 VWA3AA6NCI4 1184 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 MYADML2A6NDP7 307 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 WDR64B1ANS9 1081 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 EML1O00423 815 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 CHMP2AO43633 222 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 ZEB2O60315 1214 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 KPNA6O60684 536 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 PPP6R2O75170 966 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 MMP3P08254 477 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 HOXD8P13378 290 aaPredicted RBP8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 CAPN2P17655 700 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 NCLP19338 710 aaKnown RBP8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 CST5P28325 142 aaPredicted RBP8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 SFNP31947 248 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 GJA8P48165 433 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 JAK3P52333 1124 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 BEX3Q00994 111 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 KCNA10Q16322 511 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 TMEM266Q2M3C6 531 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 BRDTQ58F21 947 aaPredicted RBP8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 SWSAP1Q6NVH7 229 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 MIS18BP1Q6P0N0 1132 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 IGSF22Q8N9C0 903 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 RDM1Q8NG50 284 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 KCNG4Q8TDN1 519 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 U2AF1L4Q8WU68 220 aaKnown RBP8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 LEO1Q8WVC0 666 aaPredicted RBP8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 TSEN34Q9BSV6 310 aaKnown RBP8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 ZBED2Q9BTP6 218 aa8.49□□□□□ -1.05
AC004540.1-206ENST00000448056 SLC4A5Q9BY07 1137 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms