RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 DNAJC19Q96DA6 116 aa27.76■■■□□ 2.03
RFFL-206ENST00000447669 MPHOSPH6Q99547 160 aaKnown RBP27.76■■■□□ 2.03
RFFL-206ENST00000447669 SLC15A5A6NIM6 579 aa27.75■■■□□ 2.03
RFFL-206ENST00000447669 GJC2Q5T442 439 aaPredicted RBP27.75■■■□□ 2.03
RFFL-206ENST00000447669 RUSC1Q9BVN2 902 aa27.75■■■□□ 2.03
RFFL-206ENST00000447669 DDX41Q9UJV9 622 aaKnown RBP27.75■■■□□ 2.03
RFFL-206ENST00000447669 PCDHA10Q9Y5I2 948 aa27.75■■■□□ 2.03
RFFL-206ENST00000447669 SLC26A4O43511 780 aa27.75■■■□□ 2.03
RFFL-206ENST00000447669 GGPS1O95749 300 aa27.75■■■□□ 2.03
RFFL-206ENST00000447669 SNAI1O95863 264 aaPredicted RBP27.75■■■□□ 2.03
RFFL-206ENST00000447669 L1TD1Q5T7N2 865 aaKnown RBP27.75■■■□□ 2.03
RFFL-206ENST00000447669 KLHL10Q6JEL2 608 aa27.75■■■□□ 2.03
RFFL-206ENST00000447669 SYT2Q8N9I0 419 aaPredicted RBP27.75■■■□□ 2.03
RFFL-206ENST00000447669 TRIML1Q8N9V2 468 aa27.75■■■□□ 2.03
RFFL-206ENST00000447669 FARP2O94887 1054 aaPredicted RBP27.74■■■□□ 2.03
RFFL-206ENST00000447669 EYA4O95677 639 aa27.74■■■□□ 2.03
RFFL-206ENST00000447669 QARSP47897 775 aaKnown RBP27.74■■■□□ 2.03
RFFL-206ENST00000447669 JAK3P52333 1124 aa27.74■■■□□ 2.03
RFFL-206ENST00000447669 SWSAP1Q6NVH7 229 aa27.74■■■□□ 2.03
RFFL-206ENST00000447669 FLRT1Q9NZU1 646 aa27.74■■■□□ 2.03
RFFL-206ENST00000447669 GABBR1Q9UBS5 961 aa27.74■■■□□ 2.03
RFFL-206ENST00000447669 AP5Z1O43299 807 aa27.74■■■□□ 2.03
RFFL-206ENST00000447669 MYL1P05976 194 aa27.74■■■□□ 2.03
RFFL-206ENST00000447669 CAP1Q01518 475 aa27.74■■■□□ 2.03
RFFL-206ENST00000447669 UTP14CQ5TAP6 766 aaKnown RBP27.74■■■□□ 2.03
RFFL-206ENST00000447669 CCDC60Q8IWA6 550 aaPredicted RBP27.74■■■□□ 2.03
RFFL-206ENST00000447669 TRMT44Q8IYL2 757 aaKnown RBP27.74■■■□□ 2.03
RFFL-206ENST00000447669 MED15Q96RN5 788 aa27.74■■■□□ 2.03
RFFL-206ENST00000447669 SENP7Q9BQF6 1050 aa27.74■■■□□ 2.03
RFFL-206ENST00000447669 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.74■■■□□ 2.03
RFFL-206ENST00000447669 SFNP31947 248 aa27.73■■■□□ 2.03
RFFL-206ENST00000447669 CCL14Q16627 93 aa27.73■■■□□ 2.03
RFFL-206ENST00000447669 TAPT1Q6NXT6 567 aa27.73■■■□□ 2.03
RFFL-206ENST00000447669 ABHD15Q6UXT9 468 aa27.73■■■□□ 2.03
RFFL-206ENST00000447669 NACC1Q96RE7 527 aa27.73■■■□□ 2.03
RFFL-206ENST00000447669 ZSWIM4Q9H7M6 989 aa27.73■■■□□ 2.03
RFFL-206ENST00000447669 PPP1R3GB7ZBB8 358 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 CYP2B6P20813 491 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 VEGFBP49765 207 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 PLCB2Q00722 1185 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 STK4Q13043 487 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 CCDC62Q6P9F0 684 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 ZNF862O60290 1169 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 RHOBTB3O94955 611 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 TXNP10599 105 aaKnown RBP27.72■■■□□ 2.03
RFFL-206ENST00000447669 STX17P56962 302 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 MAP2K5Q13163 448 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 PRAMEF19Q5SWL8 479 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 ZNF658Q5TYW1 1059 aaPredicted RBP27.72■■■□□ 2.03
RFFL-206ENST00000447669 GLIS3Q8NEA6 775 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 KATNBL1Q9H079 304 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 NAT10Q9H0A0 1025 aaKnown RBP27.72■■■□□ 2.03
RFFL-206ENST00000447669 EXOC1Q9NV70 894 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 TBC1D7Q9P0N9 293 aa27.72■■■□□ 2.03
RFFL-206ENST00000447669 SYNGAP1Q96PV0 1343 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 RSPH10B2B2RC85 870 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 TNPO2O14787 897 aaKnown RBP27.71■■■□□ 2.03
RFFL-206ENST00000447669 RSPH10BP0C881 870 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 TGFB3P10600 412 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 KCNB1Q14721 858 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 PLA2G4FQ68DD2 849 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 RINT1Q6NUQ1 792 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 MLKLQ8NB16 471 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 TINF2Q9BSI4 451 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 SLC39A2Q9NP94 309 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 BMP2KQ9NSY1 1161 aaPredicted RBP27.71■■■□□ 2.03
RFFL-206ENST00000447669 MGAMO43451 1857 aa27.71■■■□□ 2.03
RFFL-206ENST00000447669 MYH9P35579 1960 aaKnown RBP27.71■■■□□ 2.03
RFFL-206ENST00000447669 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.7■■■□□ 2.03
RFFL-206ENST00000447669 KRT18P05783 430 aaKnown RBP27.7■■■□□ 2.03
RFFL-206ENST00000447669 ADCYAP1R1P41586 468 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 PRCPP42785 496 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 PSMC5P62195 406 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 GIT2Q14161 759 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 HSDL1Q3SXM5 330 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 UNC13DQ70J99 1090 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 SMAP1Q8IYB5 467 aaPredicted RBP27.7■■■□□ 2.03
RFFL-206ENST00000447669 NEK9Q8TD19 979 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 REEP2Q9BRK0 252 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 ZHX3Q9H4I2 956 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 MLXIPQ9HAP2 919 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 RMND1Q9NWS8 449 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 GJD2Q9UKL4 321 aa27.7■■■□□ 2.03
RFFL-206ENST00000447669 GSTTP1A0A1W2PQM5 241 aa27.7■■■□□ 2.02
RFFL-206ENST00000447669 SFI1A8K8P3 1242 aa27.7■■■□□ 2.02
RFFL-206ENST00000447669 BECN2A8MW95 431 aa27.7■■■□□ 2.02
RFFL-206ENST00000447669 NEDD9Q14511 834 aa27.7■■■□□ 2.02
RFFL-206ENST00000447669 NCAPHQ15003 741 aa27.7■■■□□ 2.02
RFFL-206ENST00000447669 MAMDC4Q6UXC1 1216 aa27.7■■■□□ 2.02
RFFL-206ENST00000447669 ZNF467Q7Z7K2 595 aaPredicted RBP27.7■■■□□ 2.02
RFFL-206ENST00000447669 FGFBP2Q9BYJ0 223 aa27.7■■■□□ 2.02
RFFL-206ENST00000447669 CEP350Q5VT06 3117 aa27.69■■■□□ 2.02
RFFL-206ENST00000447669 BACH1O14867 736 aa27.69■■■□□ 2.02
RFFL-206ENST00000447669 TRPA1O75762 1119 aa27.69■■■□□ 2.02
RFFL-206ENST00000447669 PSAPP07602 524 aa27.69■■■□□ 2.02
RFFL-206ENST00000447669 YWHABP31946 246 aaKnown RBP27.69■■■□□ 2.02
RFFL-206ENST00000447669 NPEPPSP55786 919 aa27.69■■■□□ 2.02
RFFL-206ENST00000447669 PANK4Q9NVE7 773 aa27.69■■■□□ 2.02
RFFL-206ENST00000447669 CAVIN2O95810 425 aa27.68■■■□□ 2.02
RFFL-206ENST00000447669 SUPT20HL2P0C7V6 817 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms